Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0216 ATGTCGAATCACGACGCTCAAGTATTCAATTGGCACTACGACGGAGGCGCGATTGACGACGAAAGCCTCGAAATCCATGGCCGGAAGTTCTTCTTCTTCCTCGTTCTCTTCGTCATTGTCCTCTTCACCATCGTTTTCTTCCTCTACGTCCGGTGGATCTGCCGCCCCCAAACATTCTCTTCATTTCGAAGACGCCACGCGCTACAAACGCCGCCGTCGTCTCAGGGACTCGCAGCCGAAACGATAAAGAAACTGCCGATAGTGTTGCATCAGACGAGGTCGGGTCAGGATAGCGCGTGTGAGTGTTGCATATGTTTGAGCGCGTTCAGAGATGATGAGAAGCGGCCGTCATCATCATCGAGCAGAGTCTTGACATCTGAGGTGTCAAGGTGGAAGAAGAAGCGTATGAGGAGGCTAAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAG 456 0.5219 MSNHDAQVFNWHYDGGAIDDESLEIHGRKFFFFLVLFVIVLFTIVFFLYVRWICRPQTFSSFRRRHALQTPPSSQGLAAETIKKLPIVLHQTRSGQDSACECCICLSAFRDDEKRPSSSSSRVLTSEVSRWKKKRMRRLKRKRRKMRQRSK 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0216 151 Pfam Ribosomal protein L41 130 151 IPR007836 GO:0003735|GO:0005840|GO:0006412
Lal22g0216 151 MobiDBLite consensus disorder prediction 131 151 - -
Lal22g0216 151 PANTHER RING-H2 FINGER PROTEIN ATL66 2 114 - -
Lal22g0216 151 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 114 IPR044675 -
Lal22g0216 151 MobiDBLite consensus disorder prediction 111 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0216 Lal-Chr22 1331598 1334171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0216 2 114 C3H Transcription Factor Family AT3G11110 34.783 1.23e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0216 - - ahf:112702355 103.219