Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0213 ATGGGTGGGAATTCCCCATGTGCATCATGCAAACTTTTGAGACGCCGCTGCACCAAAGATTGCATCTTTGCTCCTTATTTCCCTTCAGATGACCCTCAAAAGTTCGCCATAGTTCACAAGGTTTTTGGTGCTAGCAATGTTAGCAAAATGTTGCAGGAACTTCAGGTTCACCAGAGAGAGGATGCAGTGAGCAGTTTAGTGTATGAGGCAAATGCAAGAGTGAGGGACCCTGTATATGGTTGTGTTGGAGCGATATCTTATCTTCAAAATCAGGTTTCAGAGCTTCAGATGCAGCTTGCAGTTGCTCAAGCAGAGATTCTCTGCATCCAGATGCAACATGAACCTGTACTCATGCCTACCCAAGAAATCATGGACTCGGATCAGAAATCTTACTTTAATTTTGGATCTTCTAGCAATGTAATTCATGATTCTCTCAATATAGAGAATATTTTTGGACATGACATGGTTTCTTGA 474 0.4219 MGGNSPCASCKLLRRRCTKDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELQVHQREDAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQHEPVLMPTQEIMDSDQKSYFNFGSSSNVIHDSLNIENIFGHDMVS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0213 157 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Lal22g0213 157 Coils Coil 85 105 - -
Lal22g0213 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 125 - -
Lal22g0213 157 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Lal22g0213 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 2 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0213 Lal-Chr22 1315018 1316233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0213 3 128 AS2 family AT2G30130 84.127 1.55e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal22g0213 LOB 4.2e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0213 - - lang:109360574 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0213 22 1315018 1316233 Lal22g0213 22 1315018 1316233 ECH
Lal22g0213 22 1315018 1316233 Lal6g0221 6 1478607 1479840 LSH