Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0210 ATGTTAATTTTCCACCGATTCAACCCTGCCACCGATGCTGCCACCACAGCCATCGCTAACGGCGTCAACTTCCCAAAGCACCAACCACCACCACAAGTGCGCTTTCTATCCCTCTCCTCCGCCAAAGCAACCGTTCCCGATACGGTGGCTCTCTATCACGATCAGGCGGTGGGGCCGAACCAGTGCTGCTCCGTCGTGATCCAGCATATAGACGCTCCAATTTCCTCCGTGTGGTCCGTCGTCCGGCGCTTTGACAACCCGCAGGGTTACAAACACTTCGTGAAGAGCTGCCACGTGGTCACCGCCGACGGCATTCGTGTCGGAGCTATCCGTGAAGTGAGGGTTATTTCGGGTCTCCCCGCCGCATCAAGCACGGAGCGGTTGGAGATCTTAGACGAGGAGAGCCATGTCATCAGCTTCAGTGTACTTGGCGGTGACCACCGTTTGAAGAATTACAGGTCGGTGACGACACTTCACGGCGACGGTAATGGAGGAACAATTGTTATAGAATCATACGTGGTTGATGTACCGCAGGGTAACACAAAAGAAGAGACATGCGTGTTTGTAGATACCATCGTACGGTGCAACTTGCAGTCTCTGGCTACTAAATCGCAGTATTCAAAACTCTGA 630 0.5349 MLIFHRFNPATDAATTAIANGVNFPKHQPPPQVRFLSLSSAKATVPDTVALYHDQAVGPNQCCSVVIQHIDAPISSVWSVVRRFDNPQGYKHFVKSCHVVTADGIRVGAIREVRVISGLPAASSTERLEILDEESHVISFSVLGGDHRLKNYRSVTTLHGDGNGGTIVIESYVVDVPQGNTKEETCVFVDTIVRCNLQSLATKSQYSKL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0210 209 CDD PYR_PYL_RCAR_like 62 203 - -
Lal22g0210 209 Pfam Polyketide cyclase / dehydrase and lipid transport 68 204 IPR019587 -
Lal22g0210 209 PANTHER - 29 202 - -
Lal22g0210 209 Gene3D - 26 208 IPR023393 -
Lal22g0210 209 SUPERFAMILY Bet v1-like 62 202 - -
Lal22g0210 209 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 29 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0210 Lal-Chr22 1296689 1298032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0210 K14496 - gmx:100798803 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0722 14 8583289 8584460 Lal22g0210 22 1296689 1298032 ECH
Lal22g0210 22 1296689 1298032 Lal22g0210 22 1296689 1298032 ECH
Lal22g0210 22 1296689 1298032 Lal17g0667 17 4719945 4721613 ECH
Lal4g1589 4 20099636 20100292 Lal22g0210 22 1296689 1298032 PCT
Lal22g0210 22 1296689 1298032 Lal4g1589 4 20099636 20100292 PCT