Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0204 ATGACTAATGTGGTAGAAGTGAAGGTTGGTTTTCATTGTGACGAGTGTATCAAGAAAATTCTCAAAGCCATCAAGAAGATTGAAGATATTGAAACGTATAACGTGGAGAAAGAGCTGAACAAGGTAATCGTTACGGGCAACGTCACAACAGAAGAAGTGATTAAAGTCCTTCAAAAGATTGGAAAGAACGCAACCCCATGGGAACATTGTTCTTTGATTTTCATCCTCTCACAATGCATCGATCTATTTCTCTGTCCCCTAGGCCAATGCTCTATTGTATCTCAGATTCTTGGTGGAGTAATATTTGGCCCTTCACTTCTGGGGCACATTAAGGAGTTATCAGATTCGTTGTTCCCTGCAAAAGGTTCTACAACAATTGACACATCAGCAGCATTTGGAGTCATGTACTTCTTTTTCACAGCAGGTGTTAAGATGGATCCAACCACATTGTTGAAAACAGAAATAAAGGGTGTCACTATAGGCCTTTCTGTATTTTTATTCACATTGACAATCCCTACTACAATGTCCATTCTAATGGTTAAGTATGTACCCATGAACAAGAGCCTTGCAAAATCTCTACCCTTCATAGCCACATCACAATCCATAACTGCATTTATTGTCATAGCCATCTTCCTTAGAGAACTTCAAATCCTAAACACTGACTTAGGCCGTCTAGCTATATCTACAGCTATGTTTGGGGATATGCATTATGTTATGGGGCCATTACTACTAGGCTTAGCTATTCCAGAAGGGCCACCTTTAGGAACAGCTTTGATGAGAAAAATGGAGACCCTCTCTTATGGTTTCTTTTATCCATTCTACCTTGCTGCAAGTGGACTACATATTAATATCTTCAAAGTGGATTTTAAGTCCTTGTGGATTGTGTGTGTCATAGTAGTTGTCGCATTCGTGGTAAAGATATTTGCTGTTATGTTAACAGGATATTACCACAATGTTTCCATCAAAGACTGTTTTGTGATGGGGCTCATTCTAAATGCAAGAGGAATAGCAGATATTGTTGTTTACAATATATGGAGAGCAAGGAAGCTAATGACTGATCAAGATTTCTCTTTGGCAGTGTTATCCATCATAGTGGTAAACGCTATCATAACACCACTAATAAAATTATTGTATGATCCCTCAAAACAGTACTACTACATAACCAGATGCTCAATGCAACATAGTAAGAGAGAATCAAAGCTTCACATCATGGTCTGCATTCACAAGAACGAAAACATCCCGACAATGATGAGTCTCTTAGAAGCATCCTATGCTAGTGAAGAAAGCAATATTGAAGTGATAGCACTCATCCTGGTGGAGATTATGGGAAGATCTAGGCCTCTTCTAGTTGCTCACCAACCCCACGAAACCCTGAATTCAACCTCACCCAAATCAACTCAAATCCACAATGCCTTTAGACAGTATGCATATCAGCACAAAGGGTGTGCAAAAGTTCAATCATTCACTTCAATCTCCAACTTTGATACAATGCATGATGATGTTTGCCGAATTGCACTTGATAGAAGTGCTAACATTTTGATCATGCCATTTCACAAGCATTGGAAAATAGATGGTAGTGTTGTTGTAATTAGTAGAGCCATACAAGACATGAACATTAAGATACTTGAACGAGCACCATGTTCAGTTGGTATCCTTGTTGATAGAGGTATGATTAGTAGTTCATTATCATCACTCTTATCTTCCAAACCAGTGTATCATGTAGCTGTGTTCTTCATTGGAGGTGCAGATGATGCAGGCATAAATATGTAG 1770 0.3881 MTNVVEVKVGFHCDECIKKILKAIKKIEDIETYNVEKELNKVIVTGNVTTEEVIKVLQKIGKNATPWEHCSLIFILSQCIDLFLCPLGQCSIVSQILGGVIFGPSLLGHIKELSDSLFPAKGSTTIDTSAAFGVMYFFFTAGVKMDPTTLLKTEIKGVTIGLSVFLFTLTIPTTMSILMVKYVPMNKSLAKSLPFIATSQSITAFIVIAIFLRELQILNTDLGRLAISTAMFGDMHYVMGPLLLGLAIPEGPPLGTALMRKMETLSYGFFYPFYLAASGLHINIFKVDFKSLWIVCVIVVVAFVVKIFAVMLTGYYHNVSIKDCFVMGLILNARGIADIVVYNIWRARKLMTDQDFSLAVLSIIVVNAIITPLIKLLYDPSKQYYYITRCSMQHSKRESKLHIMVCIHKNENIPTMMSLLEASYASEESNIEVIALILVEIMGRSRPLLVAHQPHETLNSTSPKSTQIHNAFRQYAYQHKGCAKVQSFTSISNFDTMHDDVCRIALDRSANILIMPFHKHWKIDGSVVVISRAIQDMNIKILERAPCSVGILVDRGMISSSLSSLLSSKPVYHVAVFFIGGADDAGINM 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0204 589 SUPERFAMILY HMA, heavy metal-associated domain 3 68 IPR036163 GO:0046872
Lal22g0204 589 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Lal22g0204 589 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 70 235 - -
Lal22g0204 589 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 236 585 - -
Lal22g0204 589 PANTHER CATION/H + ANTIPORTER 70 235 - -
Lal22g0204 589 PANTHER CATION/H + ANTIPORTER 236 585 - -
Lal22g0204 589 Gene3D - 2 66 - -
Lal22g0204 589 Gene3D - 69 234 IPR038770 -
Lal22g0204 589 Gene3D - 235 384 IPR038770 -
Lal22g0204 589 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Lal22g0204 589 Pfam Sodium/hydrogen exchanger family 235 373 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0204 Lal-Chr22 1267053 1270699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0204 236 584 Antiporter Super Family AT2G13620 36.441 6.10e-76 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0204 - - gmx:100811954 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1398 18 16216104 16219131 Lal22g0204 22 1267053 1270699 LSH