Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0201 ATGTTTGTTGACTCAGAATCTAACATCACCCATGTTGTTGCCCCTCTTCTACCACAAGAAGAAGATCATTGTTCCCAACATGGGTCCATTTCTGGAGCAGTGTTCAACGTATCAACCACCATGATTGGTGCAGGAATCATGTCAATCCCAGCCACCATGAAGGTGCTAGGAATAATTCCAGGTTTGGTGGTAATTGTGTTGGTGGCACTAATAACAGATATCACAGTGGAGTTTATGTTAAGGTACACAAGTTCAGGCAAATCTATTACCTATGCTGGCATGGTAGGTGAATCATTTGGTCCCCTTGGATCCCTTGCTGTTAAGATTTGTGTTATCATAACTAATCTTGGTGTCCTTATCGTCTATCTCATTATTCTTGGAGATGTGCTATGTGGAAATGAGTCAAATGGAATGACACACTTGGGCATTCTACAAGATTGGTTTGGCATCCATTGGTGGACCTCTCGCGCTTTTGCTCTTCTAATACTCGCACTCTTCATTATTCTTCCATTGGTTATGTTAAGGCGTGTTGATTCACTCAGGTATACTTCTGCAATATCAATCCTACTAGCATTGGTCTTTGTTGTAATAAGCTCATCCATGTCATTTTATGCATTATGGTGCGGCAAAACTCAGTCACTTAGGATACTCCCTGATTTCTCAAAAGTCAATGTCCTTGACCTTTTCACCACTGTCCCAATCTTTGTCACAGGTTTCGGCTTCCATGTCAATGTTCACCCGATTAGAGCAGAGCTTAGAAAACCAGGGGACATGATTTGGGCAGTGCGGATTTCATTGATAATCAGCATGGTCGTTTACTTCGCTATAGGCTTCTTTGGGTACCTATTGTTCGGGGACTCAATCATGGCCGATATGCTAGTAAACTTTGATCATAGTTCCAATACTCCTGCAGGTCGATTTCTCAACGACATTGTTCGGTTAAGCTATGCACTCCATCTAGCACTTGTGTTCCCCATCATGAGCTATTCCTTAAGGGCCAACATAGATGAACTAGTATTCTCAAACAAAAATAGGCCTCCCCTGGCATTAGACTCAACTAGATTTGTGTCTCTAACTCTATCTTTGCTTGCATTCACATACTTGGTGGCTGTAGCCATCCCAAACATTTGGGATTTCTATCAATTTTTGGGATCCACAACAATTGTTTGCCTCTCATTCATCTTCCCTGCCTCAATCATTCTAAGGGATATGCATGGCATCTCAACTGCAAAAGATAAGGTCATGGCAATAGTGTTGATTGTTTTGGCTGTGGGAACAAGTGCAATTGCTATATGGACCAACTTGTATAGTTAA 1314 0.4178 MFVDSESNITHVVAPLLPQEEDHCSQHGSISGAVFNVSTTMIGAGIMSIPATMKVLGIIPGLVVIVLVALITDITVEFMLRYTSSGKSITYAGMVGESFGPLGSLAVKICVIITNLGVLIVYLIILGDVLCGNESNGMTHLGILQDWFGIHWWTSRAFALLILALFIILPLVMLRRVDSLRYTSAISILLALVFVVISSSMSFYALWCGKTQSLRILPDFSKVNVLDLFTTVPIFVTGFGFHVNVHPIRAELRKPGDMIWAVRISLIISMVVYFAIGFFGYLLFGDSIMADMLVNFDHSSNTPAGRFLNDIVRLSYALHLALVFPIMSYSLRANIDELVFSNKNRPPLALDSTRFVSLTLSLLAFTYLVAVAIPNIWDFYQFLGSTTIVCLSFIFPASIILRDMHGISTAKDKVMAIVLIVLAVGTSAIAIWTNLYS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0201 437 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 12 436 - -
Lal22g0201 437 PANTHER AMINO ACID TRANSPORTER 12 436 - -
Lal22g0201 437 Pfam Transmembrane amino acid transporter protein 28 426 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0201 Lal-Chr22 1254422 1256920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0201 16 437 Amino Acid or Auxin Permease AAAP Family AT3G56200 53.176 1.90e-155 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0201 - - ahf:112765408 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0201 22 1254422 1256920 Lal22g0201 22 1254422 1256920 ECH
Lal17g1601 17 17399983 17403286 Lal22g0201 22 1254422 1256920 PCT