Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0200 ATGGTTTCTACAGAGCAAAAGAGAGCACTACATGAGAAGCTACAACTCCTTCGCTCTATTACTAACTCTCATGCTGTAGTTCTCTCTGCACCATCTTCTGATATCTTTCTTTTCATTGGGTTTCTGCATGAATATTCTCAACGGAATCAACCAATTCCCTTAAAGAATCTAACCAAAACCTCGATCATAATCGATGCATCAAAGTATATCGAAGAGCTGAAGGAAAAAGTAGGAAGACTAAATGAAGAAATAGCCACTGCAGAAACTTCAAGTAACCTCAATGATCCATTGCCAATGGTTACGGTAGAAACCCTAGAAAAAGGGTTTCTTATAAATGTTTTTGCAGCAAAAAGCTGTCCAGGTTTGCTCGTTTTCATATTGGAAGCCTTTGAAGATATGGGTCTTACATTGGTGGAAGCTAGGGTTTCTTGTACTGACACTTTTCAATTTCAAGCAGTTGGAGGAGAAAATGAAGAAGCAGTTCAGACTATTGATGCACAAGCTGTCAAAGAAGTAGTGGGAGAAGCAATAAAGAATTGGAGCGAAAGTGTCGATCAAGAGTAA 564 0.3883 MVSTEQKRALHEKLQLLRSITNSHAVVLSAPSSDIFLFIGFLHEYSQRNQPIPLKNLTKTSIIIDASKYIEELKEKVGRLNEEIATAETSSNLNDPLPMVTVETLEKGFLINVFAAKSCPGLLVFILEAFEDMGLTLVEARVSCTDTFQFQAVGGENEEAVQTIDAQAVKEVVGEAIKNWSESVDQE 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0200 187 CDD ACT_UUR-ACR-like 120 177 - -
Lal22g0200 187 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 41 187 - -
Lal22g0200 187 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 26 - -
Lal22g0200 187 Coils Coil 63 90 - -
Lal22g0200 187 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 41 187 - -
Lal22g0200 187 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0200 Lal-Chr22 1249704 1251233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0200 57 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 26.562 9.06e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0200 - - tcc:18600910 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0779 14 9661669 9663371 Lal22g0200 22 1249704 1251233 ECH
Lal9g1711 9 19355086 19356160 Lal22g0200 22 1249704 1251233 ECH
Lal5g1019 5 12581940 12583783 Lal22g0200 22 1249704 1251233 ECH
Lal3g0659 3 5146772 5153474 Lal22g0200 22 1249704 1251233 ECH
Lal22g0200 22 1249704 1251233 Lal22g0200 22 1249704 1251233 ECH
Lal3g0659 3 5146772 5153474 Lal22g0200 22 1249704 1251233 PCT
Lal21g1274 21 15982908 15986415 Lal22g0200 22 1249704 1251233 PCT
Lal22g0200 22 1249704 1251233 Lal3g0659 3 5146772 5153474 PCT
Lal22g0200 22 1249704 1251233 Lal21g1274 21 15982908 15986415 PCT