Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0195 ATGGGTTTCACTGGGGGATTGGTAAGAAGTGTCTTCTCCAGAAATTGTTCTGCTGGGTCTCATGAAAGCAAAGTGAAACGCGATACTGCTGAAAATAGAAGATGGGTATCTGTTAGAACATACTTGTGTGGTGATGAATTTAATTCAGTCCTTGCCGAGGAAGATTCAGCTTTGTTTAAGAGCTCCGAATTCACGGTTACGCAGCACATGCAAGAGGACTTGGCTGATAAAGAAGAGGCTAAAAGTGAAGAAACCGTGGAGAATAGACCAGACACAAACTCCAAACTATTGAATGAAGAAGCTGCAGCTATTGTTATTCAGTCAGCATATAGAGCCTTCTGGTTAAGGCGCCAAAATGAAGAAATCAGATTGAAAACTGATAAGGAGGATCTCAATTTAGTAACAAATAGCCCAGACAGGAATTCCTTGAGCACATCAATTGAAGTCCAAACCGGGAATTCTACTGAAGTTTTCTCGGTTGAAGGAGAAAAAAAGAGTATTTACCAACAGAGGACCAGAACTCAAGTAATAAAGCAAAAGGACTGGGATGACAGTACCGTGAGTAGCTATGTCGCGAAAATGAGGATGCAGAACAGAATGGAGGCAACAACCAGGAGGGAAAGAGCACTAGCTTATGCTTTCTCACAACAGCTACGGATTTGTTCAAAGAGAAAATCAACAAAATATAATAGCATGGAACCAAATATGAGTTGGAATTGGCTTGAAAGGTGGATGGCAACCCGGCTTCCAGACACCTCATCTGTTGAGAGCCATTCTATGAAGCAGTATGATCCTTTTAACAGTAATAATCATAAATTCGCTATGAAGACGAGATTTTTAGATGCTGCTGGGGAAGAAAAAGAGAGCTGCGGGTCAAATGAAGTGCCCCTTCATTTTGATAGCTATTCAGTAAGTTCAAAAGAAGAAAAATTTAGCTTCAAACCTACAAAAGCAAAGACAAACTTTAAAGCTAGGAGAACTGTATCAAGGAGGAAAACAGTGCCAAGTTATCAATTCCCTGAAGAGCAGCCAAAGGTTAGCAAGAGAGATGGTTCAAGCATGGCTGGTAAGGATATTAAGCAAAAACAAGTAGGAAGCAGCATCAAGAGAGAAATGAAATTTAGCACTCTCAAACCTTATAGCGAGTGA 1149 0.4056 MGFTGGLVRSVFSRNCSAGSHESKVKRDTAENRRWVSVRTYLCGDEFNSVLAEEDSALFKSSEFTVTQHMQEDLADKEEAKSEETVENRPDTNSKLLNEEAAAIVIQSAYRAFWLRRQNEEIRLKTDKEDLNLVTNSPDRNSLSTSIEVQTGNSTEVFSVEGEKKSIYQQRTRTQVIKQKDWDDSTVSSYVAKMRMQNRMEATTRRERALAYAFSQQLRICSKRKSTKYNSMEPNMSWNWLERWMATRLPDTSSVESHSMKQYDPFNSNNHKFAMKTRFLDAAGEEKESCGSNEVPLHFDSYSVSSKEEKFSFKPTKAKTNFKARRTVSRRKTVPSYQFPEEQPKVSKRDGSSMAGKDIKQKQVGSSIKREMKFSTLKPYSE 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0195 382 ProSiteProfiles IQ motif profile. 99 128 IPR000048 GO:0005515
Lal22g0195 382 MobiDBLite consensus disorder prediction 322 382 - -
Lal22g0195 382 PANTHER IQ-DOMAIN 33 1 365 - -
Lal22g0195 382 PANTHER IQ-DOMAIN 5-RELATED 1 365 - -
Lal22g0195 382 MobiDBLite consensus disorder prediction 75 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0195 Lal-Chr22 1219382 1221519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0195 1 338 IQD Protein Family AT5G35670 39.320 1.98e-74 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0195 - - gmx:100807137 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1410 18 16268566 16271474 Lal22g0195 22 1219382 1221519 LSH