Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0180 ATGGTATTCACTCTGACATCATCCCAAATTGCTGGCATTTTTACATCTGCTTCTTTAGCCTTTGCTGTCACTAGTATTATTACTTCAGTTGGTTATGCAGCGGCAGAATATCGAAACAGTGAATCAAGTGCTCTATTAAAGTGGAAAACCAACCTTGACAATCAAAGCCAAGCTTCTTTATCTTCATGGACATCTAGTACCAGTTTTTGCATGTGGCAAGGAATTGTTTGTGATGAATACAAGTCTGTCTCCACCATAAATGTTACTAATCTTGGACTAAGAGGAAACATTCCTAAGGAAATTGGAGAATTGAGGAGCTTGAAGTATCTATTGTTTGGATCAAACAGATTTTATGGTTCCATTCCTTCAACAATTGGAATGTTGACAAATCTTGTTGAACTTGATTTGTCACAAAACTCTCTGTCTGGTACAATCCCTTCAATTACAAACTTTATAAATTTAGAAAAACTTTGGCTCTTTAACAATAGTCTCTCTGGCCCCATTCCTGAGGAATTGGGAAAACTCCATGCTCTCACAACAATCAAATTGTTAAACAATAACTTGTCTGGGCCAATTCCATCATCCATAGGAAACTTGGTTAATTTGACTACTCTTCAACTCACTAATAATTCACTTTCTGGATCAATTCCCCCAATCCTTGGAAACTTGACAAAGTTGGTCTATTTGTCCATGGCCAATAACAGACTTTCTGGATCAATTCCTATCTCCATAGGAAACTTGGTCAATCTAAAAGGCCTCAGCATTTCAGAAAACAATATTTGTGGGCCTATTCCTTCCACCATTGGAAATTTGACAAAACTCAACTTCCTATTACTTTATATGAATAATCTTAATGGTAGATTACCACCTGAAATGAATAACCTCACCAACTTCCAAAGCTTACAACTATCATATAATGGTTTCACTGGCCCTTTGCCACAACAGATTTGCGTAGGTGGATCACTTAGAAAGTTTACTGCTGAGAATAACTATTTCACCGGTCCGGTTCCAAGAAGTTTGAAGAATTGCTCCAGTCTTGTTAGACTCAGACTTGAACAAAACTTATTGAGTGGAAATATATCAGATGATTTTGGTGTATATCCAAAGCTGGATTACATTGACTTGAGCAGCAATAACTTTTATGGTCACCTTTCACCAAATTGGGCAAAGTGCCCTAGTCTCACAAGCCTTAGGATTTCCAACAATAAATTATCTGGTGTTATACCCCCAGAGCTAGGCCAAGCACTTAAGTTAAGTGTACTCAATCTCTCTTCAAATCACTTGACCGGCATAGTTCCAAGAGAACTTAGTAACTTGACCTCATTGTTTAAACTATCCTTAAGTAACAATGAACTTTCAGGAAACATTCCAATTGAAATAGAATCTTTGCTAAGCCTTGAACTTTTGGAGTTGGCAGCAAATAATTTAGGTGGTCCAATCCCAAAACAGGTTGGAGCCTTGCTCAAATTATTTCACCTGAATTTGAGCAACAATGAATTCATGGGAAATATTCCCTTCGAATTTGGGAAATTGCAGCATCTTCAATATCTCGATCTTAGTAGGAATTTGTTGAATGGACCAATACCATCAACACTTGGAAAATTACAGATGTTGGAAAAGTTGAACCTCTCACACAATAATCTCTCTGGCACCATTCCATCTGATTTTAAGGATATGTTCAGCTTGACACATATTGACATATCTAACAACCAATTGAAGGGTCCAATTCCTAACAGTCAACCCTTTCTTAAGGCTCCAAGTGATGCATTTCAAAATAATAAAGGCTTGTGTGGTAATGTCTCTGGTTTTATGGCTTGCCCAAAGATGACTCACAACCCTCATAGCCAAAAGAAAAAACATGTCTTGATATTGGCAGCATCCATTTCGGGTGCTCTAATGCTAATAGTAGTCATGGTTAGAGTTTCGTTACACATCCATTGTCAAAGAGAAGCAAGAGAAACAGAAGAACAGGCTACAGAAGAACAAATTCAAAATCTATTTTCAATATGGAATTATGATGGACATATAGTGTATGAAAATATCATTGAAGCCACAGAGGATTTTGATGATAGATACCTCATTGGAGAAGGAGGGTCTGGAGCTGTTTACAAGGCTACCTTACACACAGGTCAAGTCGTTGCTGTGAAGAAACTTCATGCTACACTCAATGGTGAAATGCACAATTTAAAAGCATTTAAAAGTGAGGTTGAAGCCTTGACAAAAATAATACATCGTAACATTGTGAAGTTATATGGATTTTGTTCACATCCACGCATCTCATTTCTGGTTTATGAGTTCCTAGAAGGTGGTAGCTTGGATAAAGTACTAAACAATGACACACAAGCAGTAATGTTTGATTGGAATAGGAGGGTGAATGTTGTTAAAGGTGTGGCAAATGCACTATACCACTTGCATCATGGCTGTTCTCTTCCTATAGTTCATCGCGACATATCAAGCAAGAATGTTATTTTAGATTTGGAATATGAAGCTCACATTGCGGACTTCGGAACGGCTAAGATTCTGAATCCTGATTCACAAAATTTCACCTCGTTTGCTGGCACCTATGGATATGCAGCACCAGAGTTTGCTTATACTATGGAAGTGGATGAGAAATGTGATGTCTTTAGTTTTGGGGTGCTTTCTTTGGAAATAATCATGGGAAAACATCCGGGAGATCTTATTTCTTCTTTGTTTTCATCAGCTGCAACATCTACAGCATCTAATTTGCTACTGAAGGATGTCTTGGATCGACGACTTCCACATCCAATGATGCCAATTGTGAAGGAGGTGATCTTCATTGCAAAAATAACATTTGTTTGCTTGAGTCAAAGTCCACTTTCTCGCCCAACCATGGAACATGTGTATAAGGAGTTTGTGATGCCAAGATCACCTTTACTAGATTCATTTCCTATTGTCACACTTGGAGAACTCCTATATAACTGA 2943 0.3778 MVFTLTSSQIAGIFTSASLAFAVTSIITSVGYAAAEYRNSESSALLKWKTNLDNQSQASLSSWTSSTSFCMWQGIVCDEYKSVSTINVTNLGLRGNIPKEIGELRSLKYLLFGSNRFYGSIPSTIGMLTNLVELDLSQNSLSGTIPSITNFINLEKLWLFNNSLSGPIPEELGKLHALTTIKLLNNNLSGPIPSSIGNLVNLTTLQLTNNSLSGSIPPILGNLTKLVYLSMANNRLSGSIPISIGNLVNLKGLSISENNICGPIPSTIGNLTKLNFLLLYMNNLNGRLPPEMNNLTNFQSLQLSYNGFTGPLPQQICVGGSLRKFTAENNYFTGPVPRSLKNCSSLVRLRLEQNLLSGNISDDFGVYPKLDYIDLSSNNFYGHLSPNWAKCPSLTSLRISNNKLSGVIPPELGQALKLSVLNLSSNHLTGIVPRELSNLTSLFKLSLSNNELSGNIPIEIESLLSLELLELAANNLGGPIPKQVGALLKLFHLNLSNNEFMGNIPFEFGKLQHLQYLDLSRNLLNGPIPSTLGKLQMLEKLNLSHNNLSGTIPSDFKDMFSLTHIDISNNQLKGPIPNSQPFLKAPSDAFQNNKGLCGNVSGFMACPKMTHNPHSQKKKHVLILAASISGALMLIVVMVRVSLHIHCQREARETEEQATEEQIQNLFSIWNYDGHIVYENIIEATEDFDDRYLIGEGGSGAVYKATLHTGQVVAVKKLHATLNGEMHNLKAFKSEVEALTKIIHRNIVKLYGFCSHPRISFLVYEFLEGGSLDKVLNNDTQAVMFDWNRRVNVVKGVANALYHLHHGCSLPIVHRDISSKNVILDLEYEAHIADFGTAKILNPDSQNFTSFAGTYGYAAPEFAYTMEVDEKCDVFSFGVLSLEIIMGKHPGDLISSLFSSAATSTASNLLLKDVLDRRLPHPMMPIVKEVIFIAKITFVCLSQSPLSRPTMEHVYKEFVMPRSPLLDSFPIVTLGELLYN 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0180 980 Gene3D Ribonuclease Inhibitor 37 192 IPR032675 -
Lal22g0180 980 ProSitePatterns Tyrosine protein kinases specific active-site signature. 812 824 IPR008266 GO:0004672|GO:0006468
Lal22g0180 980 Gene3D Ribonuclease Inhibitor 193 293 IPR032675 -
Lal22g0180 980 Pfam Leucine rich repeat 513 572 IPR001611 GO:0005515
Lal22g0180 980 Pfam Leucine rich repeat 392 452 IPR001611 GO:0005515
Lal22g0180 980 ProSiteProfiles Protein kinase domain profile. 688 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0180 980 SUPERFAMILY Protein kinase-like (PK-like) 670 957 IPR011009 -
Lal22g0180 980 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 155 977 - -
Lal22g0180 980 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 93 169 - -
Lal22g0180 980 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 96 - -
Lal22g0180 980 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Lal22g0180 980 SUPERFAMILY L domain-like 38 313 - -
Lal22g0180 980 Gene3D Ribonuclease Inhibitor 294 614 IPR032675 -
Lal22g0180 980 SMART LRR_sd22_2 511 540 - -
Lal22g0180 980 SMART LRR_sd22_2 247 273 - -
Lal22g0180 980 SMART LRR_sd22_2 223 244 - -
Lal22g0180 980 SMART LRR_sd22_2 128 156 - -
Lal22g0180 980 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Lal22g0180 980 Gene3D Transferase(Phosphotransferase) domain 1 767 963 - -
Lal22g0180 980 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 93 169 - -
Lal22g0180 980 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 155 977 - -
Lal22g0180 980 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 96 - -
Lal22g0180 980 Gene3D Phosphorylase Kinase; domain 1 647 766 - -
Lal22g0180 980 SUPERFAMILY L domain-like 321 598 - -
Lal22g0180 980 SMART LRR_typ_2 535 558 IPR003591 -
Lal22g0180 980 SMART LRR_typ_2 391 415 IPR003591 -
Lal22g0180 980 SMART LRR_typ_2 417 438 IPR003591 -
Lal22g0180 980 SMART LRR_typ_2 128 151 IPR003591 -
Lal22g0180 980 SMART LRR_typ_2 439 463 IPR003591 -
Lal22g0180 980 SMART LRR_typ_2 511 534 IPR003591 -
Lal22g0180 980 SMART LRR_typ_2 199 223 IPR003591 -
Lal22g0180 980 Pfam Protein kinase domain 692 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0180 980 PRINTS Leucine-rich repeat signature 131 144 - -
Lal22g0180 980 PRINTS Leucine-rich repeat signature 535 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0180 Lal-Chr22 1123608 1128442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0180 23 860 Receptor kinase-like Gene Family AT4G08850 43.987 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal22g0180 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0180 - - gmx:100800924 1170.99