Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0179 ATGATGGCATCCTCCATCTTCAAACTATTTTTATCATTATTTCTTGTTTGCACCTTCTTGCATGAACCTACAAATGCCCTAAGAAAGGCATACATTGTGTACTTGGGAGGACATTCTCATGGTCCAGACCCTTCCCCTACTGAACTTGAAGCAGCTACAAATTCTCATTATCATCTTCTGGCTTCTGTTTTGGGAAGTCATGAGGAGGCTAAGGAAGCAATTATGTACTCCTACAATAAGAACATAAATGGCTTTGCTGCGCTACTTGAAAAGGAAGAAGCTTCAGAGATAGCAAAAAACCCAAATGTAGTTTCTGTATTCTTGAGCAAAGAACATAAATTGCACACTACCAGGTCATGGGAATTTCTTGGACTTGAAAAAAATGGAATAGTTCCTGCAAACTCTGCATGGAGGAAGGCCAAATTTGGTGAAAATACAATCATAGCTAATATTGATACAGGCGTTTGGCCTGAACACCCAAGTTTCAGCGACAAAGGATATGGACCTGTCCCTTCGAAGTGGCGTGGAAATGGGGTTTGTGAGATAGACCACTTTATTGGTTCAAAGAAAATATTCTGCAACAGGAAGCTAATCGGAGCAAGAATTTTCAGCAAAAACCACGAAGCAGAAGTTGGAAAGCTTCATCCATTGAACCGCACTGCGCGTGACTTTGTAGGCCATGGCACCCACACTCTATCAACCGCTGGTGGTAATTTTGCTCGAGGTGCAAACGTCTTTGGTAATGGCTATGGAACTGCTAAGGGTGGATCCCCTCGAGCTCGCGTTGTAGCCTATAAAACGTGTTGGCATACAACAGATCCGGGTGGCTGCCAAGAAGCAGACATGCTAGCAGCATTTGATCAAGCCATATATGATGGTGTTGATGTGATCTCTGCCTCAGTGGGTTGGTCTAGTCCGTATGTTGAAGCTTTATTAACAGATGGAATTTCCATAGGGTCCTTCCATGCAGTTGCTAGAAATATAGTGGTTGTTTGCTCAGGTGGGAATGATGGGCCAGCTCCTAGAACTGTCACAAATGTTGCACCCTGGTCCTTCACAGTTGCTGCTAGTACAATAGACAGGGATTTTCTCAGCAATATTTCTGTAGGCAACAAACAATATCTGAAGGGTGCTAGTCTTAATAGAGGCTTGCCACAACAGTCACGAAAGTTCTATCCATTGATTAGTTCTGTCGTTGCTAGACTTCCTAATGTGTCAATCCATGATGCCAATCTTTGCAAGCCTGGAACATTGGATCCTACCAAAGTAAGGGGGAAAATACTAATCTGCCTTCGAAGTGATAAGATACAGTCAGTTGGTGAGGGCCAACAAGCTGCTCTAGCTGGTGCAGTGGCAGTGTTTGTGAAAAATGATAAGCAAAGTGGAAATACACTTCTAGCCGAGCCTCATATTTTGCCCGGTGCAAGTATCAATGTTATGGGTTATGAAGGTTCAGGAGGCTCTCACGCCAAGCAGCTTGATGCTTACATGACTTCAGCAAGAACATACATAGGAATAAAGCCAGCTCCAGTTGTGGCCGGATTTTCATCTAGAGGACCCAGCGCTGTGCAACCGTTGATACTGAAGCCTGACATAACTGCTCCTGGTGTGAACATAATTGCTGCTTTTACACAAGCCGCTGGTCCATCTAATCTAGTATCAGATGGACGTAGGACTCTTTACAATGTACAACAAGGAACTTCTATGGCTTGTCCTCATGTTTCTGGCATCGCTGGTCTACTCAAAACAGCTCATCCTAATTGGAGTCCAGCAGCTATAAAATCAGCTATTATGACTACGGCTACCACACTAGATAACACTAATCAACCAATTCAGGATGGATTTGACAAGATAGCAACTCCATTTGAATATGGCTCTGGACATATTCAACCTAACCTTGCAATAGACCCTGGACTTGTTTATGATTTAAGCACAACTGATTACTTAAACTTCTTATGTGCTTCTGGTTACAGCCGAGCTTTACTCAAGTTGTTTGCTAATTTGAAATTATCCTACACTTGCCCAAAGTCTTACAACATTGAAGATTTCAACTATCCTTCAATCACAGTGACCCATCGCCAGACAAACCCGATTAATGTTACTCGAACAGTTACAAATGTTGGGCCTCCAAGCACATATAATGTGAAGACTCACATACTTGAAGGATTTAATGTTCTTGTTCAACCAAGTTCATTGACTTTTAAGAACACCGGGGAAAAGAAGACCTTTCAGCTCATTCTTCAGCCAAGGGGTGTGCCACGCCATGGCTTTCCGATATTTGGGAACTTGTCTTGGACTGATGGTAAGCACAGAGTAACGAGCCCTATCATAGTCCTGCAACCTCAGAAACAAGTATGA 2358 0.43 MMASSIFKLFLSLFLVCTFLHEPTNALRKAYIVYLGGHSHGPDPSPTELEAATNSHYHLLASVLGSHEEAKEAIMYSYNKNINGFAALLEKEEASEIAKNPNVVSVFLSKEHKLHTTRSWEFLGLEKNGIVPANSAWRKAKFGENTIIANIDTGVWPEHPSFSDKGYGPVPSKWRGNGVCEIDHFIGSKKIFCNRKLIGARIFSKNHEAEVGKLHPLNRTARDFVGHGTHTLSTAGGNFARGANVFGNGYGTAKGGSPRARVVAYKTCWHTTDPGGCQEADMLAAFDQAIYDGVDVISASVGWSSPYVEALLTDGISIGSFHAVARNIVVVCSGGNDGPAPRTVTNVAPWSFTVAASTIDRDFLSNISVGNKQYLKGASLNRGLPQQSRKFYPLISSVVARLPNVSIHDANLCKPGTLDPTKVRGKILICLRSDKIQSVGEGQQAALAGAVAVFVKNDKQSGNTLLAEPHILPGASINVMGYEGSGGSHAKQLDAYMTSARTYIGIKPAPVVAGFSSRGPSAVQPLILKPDITAPGVNIIAAFTQAAGPSNLVSDGRRTLYNVQQGTSMACPHVSGIAGLLKTAHPNWSPAAIKSAIMTTATTLDNTNQPIQDGFDKIATPFEYGSGHIQPNLAIDPGLVYDLSTTDYLNFLCASGYSRALLKLFANLKLSYTCPKSYNIEDFNYPSITVTHRQTNPINVTRTVTNVGPPSTYNVKTHILEGFNVLVQPSSLTFKNTGEKKTFQLILQPRGVPRHGFPIFGNLSWTDGKHRVTSPIIVLQPQKQV 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0179 785 CDD PA_subtilisin_like 366 502 - -
Lal22g0179 785 Pfam Peptidase inhibitor I9 31 115 IPR010259 -
Lal22g0179 785 Gene3D - 652 780 - -
Lal22g0179 785 ProSiteProfiles Serine proteases, subtilase domain profile. 119 635 - -
Lal22g0179 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 779 IPR045051 -
Lal22g0179 785 Gene3D - 360 504 - -
Lal22g0179 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 115 IPR037045 -
Lal22g0179 785 Pfam Fibronectin type-III domain 682 778 IPR041469 -
Lal22g0179 785 Pfam Subtilase family 143 608 IPR000209 GO:0006508|GO:0008236
Lal22g0179 785 Gene3D Peptidase S8/S53 domain 146 648 IPR036852 GO:0004252|GO:0006508
Lal22g0179 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 566 576 IPR023828 -
Lal22g0179 785 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Lal22g0179 785 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Lal22g0179 785 PRINTS Subtilisin serine protease family (S8) signature 565 581 IPR015500 -
Lal22g0179 785 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 20 779 - -
Lal22g0179 785 SUPERFAMILY Subtilisin-like 114 639 IPR036852 GO:0004252|GO:0006508
Lal22g0179 785 CDD Peptidases_S8_3 112 602 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0179 Lal-Chr22 1120156 1124746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0179 18 778 Subtilisin-like Serine Gene Family AT5G59810 54.439 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0179 - - gmx:100796255 1222.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0179 22 1120156 1124746 Lal6g0189 6 1308232 1312978 LSH