Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0172 ATGAATAACATTCTCTTATTATTGTTTATTGTTTATTTCTCTGTCTTCTTTTATGATGCTTCTGCTCTTATATCTGATGGGGTGATTCTGTTGTCACTACTGAAGCATTGGACCTTTGTTCCTCTTATCATAAACTCCACATGGAATGCATCTGATTCCATTCCATGTTCATGGGTAGGAGTCAAATGTGACCATGCTCATAATGTGGTCTCAGTTGACCTCAATGATCATGGCATTTTTGGTCAACTTGGACCACAAATTGGACAATTGCATCACTTGCACACCCTTGTGTTGTCAAGTAATAGTTTCTCAGGTGAAATACCTTCTGAGTTAAGCAATTGTAGTTTGCTTCAGTATTTAGATCTTTCTTATAACAGCTTTAGTGGACAGATACCTGGTAGTTTGAAAAAGTTACAAACTTTATGGTATATTAGCTTGGCCTCAAATCTAATGAGTGGTGAAATTCCAGATTCCTTGTTTGAAATTCCTCACTTGAAAGAAGTGAGCCTTCATAGTAACCAGCTTAATGGTTCTATCCCATCTAATATTAGCAACATGACTGAACTGTTAAAGTTGTCTCTATATGGTAATCAGTTTTCTGGGAACATTCCTTCATCTATTGGTAATTGCTCTAAATTAGAGGCGTTGTTTTTTAGTGACAACAGATTGAATGGGAACCTTCCTGAGAGTCTTCAGAATCTGGAAAATCTTGTTTATTTGATGGTTAGAAATAATAGTCTTGGAGGTACCATCCCACTTGGTTCTGGAAGCTGTAAAAGATTGTTTATTTTGGATCTCTCACTTAATGCATTTAGTGGAGCCATTCCCTCTGGCTTGGGAAATTGTAGTGCTTTAGCAGAATTTGCTGCTGAGAACAACAACTTAGTTGGCAGTATCCCATCATCCTTAGGCTTGCTACGTAAGCTTTTAATTCTTCGCCTTTCTGAGAACCATTTATCGGGGAAAATATCTCCAGAAATTGGCAACTGCAGATCTTTGAAGAAATTACATTTATATTCCAACCAACTGGAGGGAGAAATTCCTGATAAATTGGGAATGCTAAGTGAGTTAGAGGACCTTCAATTGTCTTTCAACCGTTTGACAGGTGAAATCCCAGTCAGCATTTGGAGGATTGAAAGTCTTAGGAACATCTTGGTCCACAACAATAGCCTTTTTGGGGAACTACCTTTGGAGATGACAAAGCTCAAGCATCTAAAAAATATCTCATTGTTTGACAACCGGTTCTCCGGAGTCATACCTCAGGGCTTAGGAATCAATAGCAGTTTGGTGAAGTTGGACTTCACAAATAATAAGTTCACTGGTAATATCCCTCCCAATCTTTGCTTTGGAAAACAATTACTTGTGATGTATATGGGGCTTAATCAACTTCAGGGTGGCATACCTTCTGATATAGGAAGATGTGCAACTCTAAGGAGGTTGATTCTCAATGAGAATAATTTGACTGGGTTTCTTCCTGATTTTGAAAGTAATTTAAACCTACGATACATCGACATAAGCAAGAACAACATCAGCGGAGAAATTCCATCAAATTTGAAAAATTGTAAAAATCTCACTGAAATTAATATCTCAATGAACAGGTTTAGTGGGATCATACCATCGGAGCTTGGAAAACTTGTGAAACTTGTTAGTTTGGATCTTTCGCACAACAAATTGGAAGGTTCTGTGCCACCTCAGCTGTCAAATTGCACCAAAATGGACTATTTTGATGTGGGATTCAATTTCCTAAATGGTACATTTCCATCAAGTTTGAGGACCTGGACGAGGATATCAACAATAATTTTAAGAGAGAATCATTTTACAGGGGGTATCCCAGGTGTTTTATCAGAATTTAGCACGCTTCGCGAGTTACAACTTGGTGGTAATTTGTTTGGAGGCGAAATTCCACTATCAATGGGAACATTGCAAAAACTGTTCTATGGGTTGAATCTGAGTGCTAATGGATTGACAGCTGAGATTCCTTTAGAAATTCGGAAGCTACAAGAGTTGCAAAGTCTGGATTTATCATTAAACAATTTGACAGGAAGCATAGATGTTCTTGGTGATCTTGTTTCATTAATTGAAGTCAATATTTCATACAATTTCTTCAACGGTACTCTACCAAAAAATCTGATCAAGTTTTTGAGTTTCTCACCATCATCGTTTATGGGTAATCCTCACCTATGTGTTAGTTGTTCACCTTTTCAGGACTTGAGTTGCACTAAAAATAGTTATTTGAAGGCATGTGTCTACAAGTCAACAGATCACGCTGGAATCAGTAAATTTGGAATTGTGATGATAGAACTTGGATCCTCAATTTTTGTTTCTGCTATACTGATAGCACTTGTTCACAGATATATGCGAAAAATAGTGAAGCCAGATGATTGTACAGATGACTTGTGGGTAGAGAATGGACAATTACCTCTTGCTTTACTAATGAAGGCGACAAATGATCTAGATGATACATACATTATTGGTAGAGGAGCCCATGGAATTGTTTATAAAGCTGAAATTGATTCACATAAAGCTGTAGCTGTAAAGAAGATTGTATTTGGAAGCAACCAGGGGAAGCACTTGAGTACCTTGTGCAAAGAAATCAAAGCCCTTAGGTATAAGCATAAAAATTTGGTCACATGTAGAGGCTACTGGATTGGAAAGGACTACGGTTTAATCTTCTCTGATTACATGGAAAATGGAAGCCTTCATGATATTTTGCATGTAAAAGATCCCCCACCACCCTTAAGTTGGAATGTCCGGTTTAATATAGCAGTCGGAATTGCACAAGGACTAGCATATCTACACTATGATTGTATCCCACACATAGTGCATCGAGACATCAAACCAAAGAATATACTTCTTGATGCTAGCATGGAGCCTGTTATAGCTGATTTCGGTACTGCCATGTTCAGGAACCCTAGTGAGAATTCTGGTAGTCGTTCTCAATGTAGGCAAAATCTTTCAACATGCATTGCTGGTACTGCTGGCTATATTGCACCGGAGAATGCATATGCAACACTGCCCGGCAGAAAGTCAGATGTATATAGCTATGGGGTAGTTCTGCTTGAGCTATTAACCAGAAAGAAAGTTTTAGTGATTTCATTCATGGAGAAGAAGGAACAGGAGATCCATTTAGTTAGTTGGGTTAGATCTGTCTGGTTGACAACAGGCAAAGTTGATAAGATTGTTGATTCAGACCTTGCCAGTGCATTTCTCAATTCAAATGTAGTAGCAAGCCAAGTCAGTGGTGTTCTTATGTTGGCATTAAGATGTACAGAAAGGGATCCAAGGAAGAGACCAACAATGGAAGAAGTTGTTCACTTCTATCATAGAGGCAAGTTCACAAGGAGGTGTGATGATGAGGTTTATGGTACTGAAGTTGTAGCTGATGTAGCACCACAACCATATAGCTCTCTTGATACTTTAACCGGTGTTCCAGTTGTCAGTACTAAGTCAGTTTCTCCTATTCAGGGAGGCTACAATCTCCGCGGAGAATGTAGTACGGCTGCACCATTGAGACAGATAGAAGTTACATTGAATGTGGAGAGTGAACCGGAAGATTCTAATCATTTTGGCCGATGGTGGGATGCTAATCAATTTCATCAGGGAAACTCTTGGGATGATTGGAAATCCATGTCTACACCAACAACTGATACTGATGCACTTGTAGCACAACAACCATATAGCTCTCTTGATCTTATCACACATTCTTCAGTTGTAAGTATTAATTCAGTTGCTAATACTCGGGGAAACTACCTTCTACATGGAGAATGTAGTAAGGTTGCACACTTAAAACAGATAGAAGGTACATTGAGTGTGAAGAGTGAACCTAAAGATTCCAATGATTTAAGGTGGTGGGAGGATGCTAATCAATTTGGTCTGTGA 3879 0.3857 MNNILLLLFIVYFSVFFYDASALISDGVILLSLLKHWTFVPLIINSTWNASDSIPCSWVGVKCDHAHNVVSVDLNDHGIFGQLGPQIGQLHHLHTLVLSSNSFSGEIPSELSNCSLLQYLDLSYNSFSGQIPGSLKKLQTLWYISLASNLMSGEIPDSLFEIPHLKEVSLHSNQLNGSIPSNISNMTELLKLSLYGNQFSGNIPSSIGNCSKLEALFFSDNRLNGNLPESLQNLENLVYLMVRNNSLGGTIPLGSGSCKRLFILDLSLNAFSGAIPSGLGNCSALAEFAAENNNLVGSIPSSLGLLRKLLILRLSENHLSGKISPEIGNCRSLKKLHLYSNQLEGEIPDKLGMLSELEDLQLSFNRLTGEIPVSIWRIESLRNILVHNNSLFGELPLEMTKLKHLKNISLFDNRFSGVIPQGLGINSSLVKLDFTNNKFTGNIPPNLCFGKQLLVMYMGLNQLQGGIPSDIGRCATLRRLILNENNLTGFLPDFESNLNLRYIDISKNNISGEIPSNLKNCKNLTEINISMNRFSGIIPSELGKLVKLVSLDLSHNKLEGSVPPQLSNCTKMDYFDVGFNFLNGTFPSSLRTWTRISTIILRENHFTGGIPGVLSEFSTLRELQLGGNLFGGEIPLSMGTLQKLFYGLNLSANGLTAEIPLEIRKLQELQSLDLSLNNLTGSIDVLGDLVSLIEVNISYNFFNGTLPKNLIKFLSFSPSSFMGNPHLCVSCSPFQDLSCTKNSYLKACVYKSTDHAGISKFGIVMIELGSSIFVSAILIALVHRYMRKIVKPDDCTDDLWVENGQLPLALLMKATNDLDDTYIIGRGAHGIVYKAEIDSHKAVAVKKIVFGSNQGKHLSTLCKEIKALRYKHKNLVTCRGYWIGKDYGLIFSDYMENGSLHDILHVKDPPPPLSWNVRFNIAVGIAQGLAYLHYDCIPHIVHRDIKPKNILLDASMEPVIADFGTAMFRNPSENSGSRSQCRQNLSTCIAGTAGYIAPENAYATLPGRKSDVYSYGVVLLELLTRKKVLVISFMEKKEQEIHLVSWVRSVWLTTGKVDKIVDSDLASAFLNSNVVASQVSGVLMLALRCTERDPRKRPTMEEVVHFYHRGKFTRRCDDEVYGTEVVADVAPQPYSSLDTLTGVPVVSTKSVSPIQGGYNLRGECSTAAPLRQIEVTLNVESEPEDSNHFGRWWDANQFHQGNSWDDWKSMSTPTTDTDALVAQQPYSSLDLITHSSVVSINSVANTRGNYLLHGECSKVAHLKQIEGTLSVKSEPKDSNDLRWWEDANQFGL 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0172 1292 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Lal22g0172 1292 SMART serkin_6 818 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0172 1292 Gene3D Phosphorylase Kinase; domain 1 788 894 - -
Lal22g0172 1292 Gene3D Transferase(Phosphotransferase) domain 1 895 1120 - -
Lal22g0172 1292 Gene3D Ribonuclease Inhibitor 474 739 IPR032675 -
Lal22g0172 1292 Gene3D Ribonuclease Inhibitor 305 473 IPR032675 -
Lal22g0172 1292 SMART LRR_sd22_2 666 687 - -
Lal22g0172 1292 SMART LRR_sd22_2 354 383 - -
Lal22g0172 1292 SMART LRR_sd22_2 210 236 - -
Lal22g0172 1292 SMART LRR_sd22_2 497 520 - -
Lal22g0172 1292 SMART LRR_sd22_2 545 577 - -
Lal22g0172 1292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 940 952 IPR008271 GO:0004672|GO:0006468
Lal22g0172 1292 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 10 303 - -
Lal22g0172 1292 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 296 1117 - -
Lal22g0172 1292 SUPERFAMILY RNI-like 71 421 - -
Lal22g0172 1292 Gene3D Ribonuclease Inhibitor 26 304 IPR032675 -
Lal22g0172 1292 SMART LRR_typ_2 666 689 IPR003591 -
Lal22g0172 1292 SMART LRR_typ_2 545 569 IPR003591 -
Lal22g0172 1292 SMART LRR_typ_2 186 210 IPR003591 -
Lal22g0172 1292 SMART LRR_typ_2 162 185 IPR003591 -
Lal22g0172 1292 SMART LRR_typ_2 234 258 IPR003591 -
Lal22g0172 1292 SMART LRR_typ_2 306 330 IPR003591 -
Lal22g0172 1292 SMART LRR_typ_2 354 378 IPR003591 -
Lal22g0172 1292 SMART LRR_typ_2 90 114 IPR003591 -
Lal22g0172 1292 Pfam Protein kinase domain 823 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0172 1292 PRINTS Leucine-rich repeat signature 548 561 - -
Lal22g0172 1292 PRINTS Leucine-rich repeat signature 666 679 - -
Lal22g0172 1292 ProSiteProfiles Protein kinase domain profile. 818 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0172 1292 SUPERFAMILY Protein kinase-like (PK-like) 807 1106 IPR011009 -
Lal22g0172 1292 ProSiteProfiles Leucine-rich repeat profile. 668 690 IPR001611 GO:0005515
Lal22g0172 1292 PANTHER OS08G0446200 PROTEIN 296 1117 - -
Lal22g0172 1292 PANTHER OS08G0446200 PROTEIN 10 303 - -
Lal22g0172 1292 ProSitePatterns Protein kinases ATP-binding region signature. 824 847 IPR017441 GO:0005524
Lal22g0172 1292 Pfam Leucine rich repeat 499 558 IPR001611 GO:0005515
Lal22g0172 1292 Pfam Leucine rich repeat 92 150 IPR001611 GO:0005515
Lal22g0172 1292 SUPERFAMILY RNI-like 408 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0172 Lal-Chr22 1063124 1068081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0172 14 1119 Receptor kinase-like Gene Family AT1G73080 48.442 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal22g0172 Pkinase 4.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0172 - - lang:109356786 2306.56