Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0166 ATGGAAGACAAAGAAGTAGAAAGAAGAAGTGAACGAAGTTCCATAAGATGTAAAGCTGCTATTTCTCGAAAACCAGGTGAGGCTTTGACTATTGAGGACATAATTGTGGCACCACCAATGCCTCGTGAAGCTAGGATTCGTATTATATGCACCTCTCTTTGCCACAGCGATATTACTTTTTCCAACTTGCAGGGTCCTCCTGCAATTTTCCCTAGAATTCTGGGCCATGAAGCAGTTGGGGTTGTGGAAAGTGTAGGGGAAGATGTAACTGAAGTCACAAAAGGAGATATGGTTATGACCATTTTCATGGCAGATTGTGGGGAGTGTACAGATTGCAAATCAACCAAGAGCAACCAATGTTCCAAGTTTCCTTTCAAGATCTATCCTTGGATGCATAGATGTCCTACCAGTAGATTTACTGATCTAAATGGAGAGATCATACACCATTTCATGTTTATTTCAAGTTTTAGTGAGTACACAGTGGTTGATGTTGTCAATCTAAGCAAGGTTGACCCAACAATTCCTCCCAACAGGGCATGCCTCTTGAGTTGTGGTGTATCAACTGGGGTAGGTGCTGCTTGGAAAACAGCAGGTGTGGAGCCAGGGTCTACAGTAGCAATTTTTGGTCTGGGATGTATTGGATTAGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCTACAAGGATTATTGGGGTGGATGTCAACTCAGAGAAACATGAAATTGGGAAAAAGTTCGGAGTCACAGATTTCATCAATTCTGGAGAATGCGGAGACAAATCTGTGAGCCAGATTATCAAAGAAATAACTGATGGAGGAGCAGATTATTGCTTTGAGTGTGTTGGTATGGCATCATTGGTGCATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGGAAAACAATTGTTGTAGGAGTGGACAAGCCAGGATCTATGTTGAGCCTTAGCTCTAATGAGATCCTTTTGGATGGAAAGAGCCTTATGGGATCCCTATTTGGAGGACTCAAACCTAAGTCTGATGTACCCATTCTTCTTAAACGTTACTTGGACAAGGAACTGAAGTTGGATGAGTTTGTCACACATGAGGTGGAGTTTAAGGACATCAATAAAGCTTTTGACTTATTGATTAAAGGACAGTCTCTTCGATGTGTGATTTGGATGGACAAATGA 1167 0.4216 MEDKEVERRSERSSIRCKAAISRKPGEALTIEDIIVAPPMPREARIRIICTSLCHSDITFSNLQGPPAIFPRILGHEAVGVVESVGEDVTEVTKGDMVMTIFMADCGECTDCKSTKSNQCSKFPFKIYPWMHRCPTSRFTDLNGEIIHHFMFISSFSEYTVVDVVNLSKVDPTIPPNRACLLSCGVSTGVGAAWKTAGVEPGSTVAIFGLGCIGLAVAEGARLCGATRIIGVDVNSEKHEIGKKFGVTDFINSGECGDKSVSQIIKEITDGGADYCFECVGMASLVHEAYASCRKGWGKTIVVGVDKPGSMLSLSSNEILLDGKSLMGSLFGGLKPKSDVPILLKRYLDKELKLDEFVTHEVEFKDINKAFDLLIKGQSLRCVIWMDK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0166 388 Pfam Alcohol dehydrogenase GroES-like domain 42 166 IPR013154 -
Lal22g0166 388 SUPERFAMILY GroES-like 337 385 IPR011032 -
Lal22g0166 388 Gene3D - 189 329 - -
Lal22g0166 388 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 174 349 IPR036291 -
Lal22g0166 388 PANTHER ALCOHOL DEHYDROGENASE 11 385 - -
Lal22g0166 388 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
Lal22g0166 388 SUPERFAMILY GroES-like 13 195 IPR011032 -
Lal22g0166 388 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 11 385 - -
Lal22g0166 388 Gene3D - 20 381 - -
Lal22g0166 388 Pfam Zinc-binding dehydrogenase 213 336 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0166 Lal-Chr22 1032446 1035611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0166 42 335 Monolignol Biosynthesis Gene Families AT4G37990 24.832 5.89e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0166 K00121 - gmx:100817521 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0166 22 1032446 1035611 Lal6g0168 6 1179395 1188744 LSH