Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0163 ATGTTGTTGATGCATGATGCAGGACTTAGTTGGAAAGGCATGTTGGCTACCTGGTTGATATTTTTGTTGTCAGTGGCTATTGCATTTGGGAGTTCAGATATTGATTCACTCCTTGAACTCAGGAACAGCATTCAGAATGACCCTTCTGAACTAATTCTTAATTCTTGGGATTCTAAGTCTTTAGATTCATATGGATGTCCTCAGAACTGGTATGGCATATTGTGTAGTGAGGGAAATGTTATATCAATCACTTTGGATAATGCTGGTTTGGTTGGAGAGTTCAATTTCCTTGCAATTAGTGGCCTTAAAATGCTTTACAAATTGTCAATTATGAACAATCAATTCACAGGAAGTATTTTACATATTGGTTCAATGGTGTCACTTGAATTTCTTGATTTGTCCCTCAACAAGTTTTATGGGTTGGTACCGCCTAATATTGCTGAATTAAGTAATTTAGTTTATCTGAATCTTTCTTCAAATGAATTTGGAGGTCCTCTTCTTATCGACTTTAACAAACTTGAGAGGTTGAAATACTTAGATTTGCATAGTAATAACTTTTCTGGTGATATCATGCAAATATTTCTTCTGATGGGTAGTGTGCTACATGTTGACTTAAGCAGCAATAGTTTTTCTGGTACACTGGATTTGAGACTTGGAAATGAATCATTTCTCTCCTCGATTCGGCATTTAAATGTTAGTCACAATTCCTTGTCTGGAGAGCTATTTGCTCATGATGGCATGCCATACCTTGACAATTTAATGGTGTTTGATGCTAGTAGTAATCAGTTAGTGGGTAATATACCTTCCTTTACGTTTGTGGTATCATTGAGGATTCTTCGACTTGGATGCAACCAGTTGTCAGGTTCACTACCAGAAGATTTATTGAAGGAAAGTTCAATGCTGTTGTCTGAACTTGATCTTAGTCAAAACAAGCTTGAAGGTCCGGTTGGAAGTATTACCTCTGTAACTCTGAGGAAGCTTAATATATCTTCTAACAAATTGTCAGGCCCCTTGCCTCTCACAGTAGGCCACTGTGCCGTCGTAGACTTGAGTAATAACACACTTTCGGGCAATATTACAAGGATCCAGTATTGGGGTGACTATGTGGAAGTTATTCAGCTCGGTTCAAACTCATTGACAGGAATGCTGCCAAATGAAACTTCTCAATTTTTAAGGCTAACAGCACTTAAGGTATCCAATAACTCATTGGAGGGCTTTCTCCCACCAATCTTGGGGACATACCCGGAACTAAAAGAGATTGATCTTAGCCTCAACCAACTTTCTGGTTTCCTCTTACCAAACCTTTTCACCTCAACCAAGTTGACTGATCTTAACCTCTCCAGCAATAACTTTTCTGGACCAATTCCTATTCAACTTCAGCAAATTCCAAATAATCAATTAGTTTCTGCTGAGAATTTTAGTCTTGTGTCCCTTGATCTTTCATACAACAACTTGAGTGGGCCGTTTCCTTCAAATATAAGTAATCTTTACAGTTTAGAATATATCAATCTATGTGTCAACAAATTGGAAGGTACTATTCCCGACGACCTTCGAGTTAATTTGAGAGGATTCAATGTGTCCTTCAACAATCTTTCTGGTGTTATACCAGACAATTTAATGCAATTTCCTGAATCAGCATTTCATCCTGGAAATACACTGCTGATATTTCCACCTTCACCATTTCCACCAGATGATTGGTTACTTAAAAAATCTGCAACTATGAGAGCCTTGATTGCATGTTCGGTTGCTAGTCTTTTCGTGATCGCTTTTATGGGTATTATAATCATATACTATAGGCTTCTTTGGCAAAATGAATTGACTTCTAAACAAAATGCAGAAAGAGTCATCACTCAACAGAGTTCTTCCACATCAGATATAGAGGAACCTAATAAAAATTTAGAAGTATTACCTTCTACTCAAAGGGGGTCTTATGATGATGCTGGAAACATTCATGCAATGGTAAGGAATCCAGAAGATCTAGGCCATCCTGAATTAGTTAAGAATGGGGAAGGAACACATTCTCTATTATCTTTTTCGTCTGCGTCAAATCCTTCATCCTCTAAAAGCCATCAGTTTGAGAATCCTGGTTCACTCAAAATATCCTCTCTGGATAATCTGGTTGGGGACTTGCATATGTTCGACGGGTCATTAATGCTAACCACAGAAGAACTTTCAAGTGCTTCAGCAGAAATTATTGGAAGTAGTTGTCATGGAACACTGTATAAGACTACACTTGAATCTGGTCATGCATTGGCAATCAAATGGTTAAGGGAAGGAATAACTAAAGGTAAACAGGAGTTTGCAAGAGAAGTAAAGAAACTAGGCACTATAAAGCATCCAAGTCTGGTTTCTATTCAGGGTTACTTCCTCGGGCAAAAGGAGCATGAGAGGTTGATCATATCAAATTACATGAATGCACAATCTATGGACAGTTATCTCAATGAGGCAGATAAAAGAAATCTTCAGCCTTTATCACTTGATGAAAGGCTGAAGGTGGCTGTAGATGTGGCGCGATGTCTGAATTACCTACACAATGAGAAAGCCATACCTCATGGTAACCTCAAATCCACAAACATTCTACTAGAAACTCCTAACCGAAATGTCCTTCTCACCGATTACAGCCTGCATCGGATACTTACGCCTGCTGGTACAGCTGAGCAAGTGTTGAAAGCTGGCGCACTTGGTTATCGACCTCCCGAGTTCGCTAGATCAAACAAACCAAGTCCATCCTTGAAGAGTGATGTGTATGCATTTGGAGTAGTCTTGTTAGAGCTCATAACAGGAAAAAGCTCTGGAGAAATAGTATCTGGGATTGCAGGCATGGTTGAACTCACAGATTGGGTGAGATTCTTAGCTGAAGAAAACCAGTTTAGCCACTGCTTTGATAGGTTTCTTATGGACAAACAACACAGTGGTGAAAGATCATATAGAATTCTTCATGACTTGCTCAAAGTGGCTCTTAGATGCATCCTTCCTCCATCAGATAGGCCAGACATTACTACAGTTTTTGAAGATCTTTCAACAATAAGCTACAATTCTTCATCATAG 3048 0.3875 MLLMHDAGLSWKGMLATWLIFLLSVAIAFGSSDIDSLLELRNSIQNDPSELILNSWDSKSLDSYGCPQNWYGILCSEGNVISITLDNAGLVGEFNFLAISGLKMLYKLSIMNNQFTGSILHIGSMVSLEFLDLSLNKFYGLVPPNIAELSNLVYLNLSSNEFGGPLLIDFNKLERLKYLDLHSNNFSGDIMQIFLLMGSVLHVDLSSNSFSGTLDLRLGNESFLSSIRHLNVSHNSLSGELFAHDGMPYLDNLMVFDASSNQLVGNIPSFTFVVSLRILRLGCNQLSGSLPEDLLKESSMLLSELDLSQNKLEGPVGSITSVTLRKLNISSNKLSGPLPLTVGHCAVVDLSNNTLSGNITRIQYWGDYVEVIQLGSNSLTGMLPNETSQFLRLTALKVSNNSLEGFLPPILGTYPELKEIDLSLNQLSGFLLPNLFTSTKLTDLNLSSNNFSGPIPIQLQQIPNNQLVSAENFSLVSLDLSYNNLSGPFPSNISNLYSLEYINLCVNKLEGTIPDDLRVNLRGFNVSFNNLSGVIPDNLMQFPESAFHPGNTLLIFPPSPFPPDDWLLKKSATMRALIACSVASLFVIAFMGIIIIYYRLLWQNELTSKQNAERVITQQSSSTSDIEEPNKNLEVLPSTQRGSYDDAGNIHAMVRNPEDLGHPELVKNGEGTHSLLSFSSASNPSSSKSHQFENPGSLKISSLDNLVGDLHMFDGSLMLTTEELSSASAEIIGSSCHGTLYKTTLESGHALAIKWLREGITKGKQEFAREVKKLGTIKHPSLVSIQGYFLGQKEHERLIISNYMNAQSMDSYLNEADKRNLQPLSLDERLKVAVDVARCLNYLHNEKAIPHGNLKSTNILLETPNRNVLLTDYSLHRILTPAGTAEQVLKAGALGYRPPEFARSNKPSPSLKSDVYAFGVVLLELITGKSSGEIVSGIAGMVELTDWVRFLAEENQFSHCFDRFLMDKQHSGERSYRILHDLLKVALRCILPPSDRPDITTVFEDLSTISYNSSS 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0163 1015 MobiDBLite consensus disorder prediction 618 641 - -
Lal22g0163 1015 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 18 1010 - -
Lal22g0163 1015 SUPERFAMILY L domain-like 222 469 - -
Lal22g0163 1015 PANTHER OS07G0626500 PROTEIN 18 1010 - -
Lal22g0163 1015 Gene3D Ribonuclease Inhibitor 222 562 IPR032675 -
Lal22g0163 1015 SUPERFAMILY L domain-like 473 542 - -
Lal22g0163 1015 Pfam Leucine Rich repeat 472 487 IPR001611 GO:0005515
Lal22g0163 1015 Pfam Leucine Rich repeat 438 453 IPR001611 GO:0005515
Lal22g0163 1015 SUPERFAMILY Protein kinase-like (PK-like) 730 1007 IPR011009 -
Lal22g0163 1015 Gene3D Ribonuclease Inhibitor 32 196 IPR032675 -
Lal22g0163 1015 Pfam Leucine rich repeat N-terminal domain 32 76 IPR013210 -
Lal22g0163 1015 SUPERFAMILY L domain-like 63 295 - -
Lal22g0163 1015 Gene3D Phosphorylase Kinase; domain 1 732 804 - -
Lal22g0163 1015 Gene3D Transferase(Phosphotransferase) domain 1 805 1015 - -
Lal22g0163 1015 Pfam Protein tyrosine and serine/threonine kinase 730 931 IPR001245 GO:0004672|GO:0006468
Lal22g0163 1015 ProSiteProfiles Protein kinase domain profile. 726 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0163 Lal-Chr22 1018680 1022089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0163 324 547 Receptor kinase-like Gene Family AT5G07280 32.328 3.75e-19 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal22g0163 PK_Tyr_Ser-Thr 3.9e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0163 - - ccaj:109792420 1463.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0163 22 1018680 1022089 Lal22g0163 22 1018680 1022089 ECH
Lal18g1458 18 16598787 16604289 Lal22g0163 22 1018680 1022089 LSH