Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0150 ATGGCTATTGCAGCCCCAGGGCAACTGAACGTAACCGAATACCCCACTTGGGGTTCCAGAAGCGTTGATTGCTTCGAGAAGTTGGAGCAAATTGGCGAGGGCACTTATGGTCAAGTTTACATGGCTAAAGAGATCAGCACAGGTGAAATTGTTGCCCTGAAGAAAATACGTATGGATAACGAGAGAGAGGGATTTCCCATAACTGCTATACGAGAAATCAAAATTCTAAAGAAACTACACCATGAAAATGTGATCAAGCTTAAAGAAATCATCACTTCTCCAGGTGCTGCTATTAAAGCCCCGAGAAAGATGAACAAGGAAGGCCAGGCAAATGGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTGACAGGTCTTGCTGATCGTCCTGGGATGAGATTTACAGTTCCCCAAATTAAGTGTTATATGAGACAACTTTTGACGGGGCTTCACTATTGTCATATAAATCAAGTTCTGCATCGTGATATCAAAGGGTCAAACCTTCTTATAGACAATGAAGGGAATCTGAAGCTTGCAGATTTTGGATTGGCACGATCAGTTTCTAATGACCACAATGCAAATCTTACAAATCGTGTCATCACCTTATGGTACAGGCCACCTGAGTTACTGCTAGGGTCAACGAAGTATGGGCCAGCAGTAGATATGTGGTCTGTTGGGTGCATTTTTGCTGAGCTTCTTCATGGGAAGCCTATCTTTCCAGGAAAAGATGAGCCAGAACAATTAAATAAAATATTTGAACTGTGTGGAGCACCAGATGAGGTGATCTGGCCTGGGGTTTCTAAGATTCCTTGGTATAATCAATTTAAGCCAACAAGGCCAATGAAAAGACGTCTGAGGGAAGTTTTTAGGCATTTTGATCATCATGCTTTGGAATTGTTGGAGAGGATGCTGGCACTAGATCCAGCTAAGAGAATTACTGCCAAAGATGCACTTGATGCCGAATATTTCTGGACTGATCCATTACCGTGTGATCCCAAAAGTTTACCCAAGTATGAGTCGTCACATGAGTTTCAGACAAAGAAAAAGCGCCAGCAACAACGGCAAAATGAAGAAATGGCTAAGCGTCAGAAAATGCAACACCCGCAGCAGCACACCCGTCCTCCCCCCATTCAGCAGTCTGGGCAACATGCCCAAATGCGACCAGGACCTAACCAGCAAGCTCATGGCTCTCAACAAGTTCATCCTGGTGGACCTAGTCATCATTATGGGAAGCCTCGAGGTCCATCTGGTGGGCCAGGAAGATATCCCCCCGGTGCGAACTCTGGTGGAGGATACAATCACCCGAATCGTGGAGTTCAAGGAGGAGCAGGGGGTTATGGCAGTGGACCTTATCCTCCTCAAGAGAGAGGGGCACCTTATCCTCCTCAAAGTGGTGGTGGCGGCTTTGGAGTTGGAGCTCCAAATTATACCCAGCAAGGTCCATATGGTGGGTCAGCAGGTGGCCGAGGCTCAAACATGATGGGTGGAAACCGCAACCAACAGTATGGTTGGCAACAGTGA 1542 0.4585 MAIAAPGQLNVTEYPTWGSRSVDCFEKLEQIGEGTYGQVYMAKEISTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIITSPGAAIKAPRKMNKEGQANGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHINQVLHRDIKGSNLLIDNEGNLKLADFGLARSVSNDHNANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVIWPGVSKIPWYNQFKPTRPMKRRLREVFRHFDHHALELLERMLALDPAKRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEMAKRQKMQHPQQHTRPPPIQQSGQHAQMRPGPNQQAHGSQQVHPGGPSHHYGKPRGPSGGPGRYPPGANSGGGYNHPNRGVQGGAGGYGSGPYPPQERGAPYPPQSGGGGFGVGAPNYTQQGPYGGSAGGRGSNMMGGNRNQQYGWQQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0150 513 MobiDBLite consensus disorder prediction 343 372 - -
Lal22g0150 513 SUPERFAMILY Protein kinase-like (PK-like) 17 338 IPR011009 -
Lal22g0150 513 SMART serkin_6 25 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0150 513 MobiDBLite consensus disorder prediction 376 407 - -
Lal22g0150 513 PANTHER CYCLIN-DEPENDENT KINASE C-2 6 457 - -
Lal22g0150 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Lal22g0150 513 PANTHER CELL DIVISION PROTEIN KINASE 6 457 - -
Lal22g0150 513 Gene3D Transferase(Phosphotransferase) domain 1 128 370 - -
Lal22g0150 513 Pfam Protein kinase domain 25 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0150 513 ProSiteProfiles Protein kinase domain profile. 25 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0150 513 MobiDBLite consensus disorder prediction 341 513 - -
Lal22g0150 513 MobiDBLite consensus disorder prediction 499 513 - -
Lal22g0150 513 CDD STKc_CDK9_like 25 330 - -
Lal22g0150 513 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Lal22g0150 513 Gene3D Phosphorylase Kinase; domain 1 12 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0150 Lal-Chr22 931179 939204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0150 1 513 Core Cell Cycle Gene Families AT5G10270 75.096 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lal22g0150 Pkinase 2.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0150 K08819 - gmx:100793565 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0150 22 931179 939204 Lal6g0159 6 1128556 1133726 LSH