Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0135 ATGGGCAATTGTTGCTTAGGTGCTAAGGATAATGCTCCAGAAGACAAGGGAGAAACCAACCAAAACCAACAAACTAGAAAAAACATTAACAACGATAGCGACTCGGCCACCACACCACCACCATCATCATCAAAACCTTCTAAGCCATCAAGACCATCCCCTATTGGCCCTGTCCTTGGAAGACCAATGGAGGATGTGAAATCCACCTACACCATTGGAAAGAAGCTAGGGAAAGGTCAATTTGGTGTTACACATTTGTGCACACATAAGGTCACTGGAAAACAATATGCATGCAAAACCATAGCCAAGAGGAAGCTTGTGAACAAAGAAGAGTTAGAGGATTGTAGGAGGGAGGTGCAAATCATGCATCACCTAATAGGCCAGCCTAATATTGTTGAACTTGTTGGTGCCTTCGAGGACAAGCAATCTGTGCATTTGGTTATGGAATTGTGTGCTGGTGGTGAGCTCTTTGATCGTATCATCACGAAGGGACATTATACTGAGCGTGCTGCTGCTTCGTTGTTGAGAACTATTGTTGAGATTGTTCATACTTGCCATTCCATGGGTGTCATTCATAGGGATCTTAAGCCTGAGAATTTCCTCTTGTTGAACAAGGATGAAAATTCACCCCTTAAGGCAACGGATTTTGGTCTATCAGTTTTCTACAAGCAAGGAGAGGTGTTTAAAGACGTTGTTGGTACTGCATATTACATAGCACCTGAGGTGTTGAAGAGGAAATATGGCCCTGAAGCTGACATATGGAGTGTAGGTGTCCTGCTATACATTCTTCTATGTGGTGTTCCTCCATTTTGGGCAGAATCCGAAACCGGGATATTCAAAGCTATCCTAAAAGGTCAGGTTGACTTTAGCAGTGACCCGTGGCCCTCAATATCACCTCAGGCAAAAGATCTTGTAAGGAAAATGTTGAATTCCAATCCCAAGCAGAGACTGACAGCCCACCAAGTCCTCAATCATCCATGGATCAAGGAGGATGGAGAAGCACCAGATACACCTCTTGACAATATAGTGCTGAATAGGCTCAAACAATTCAGAGCAATGAACCAATTCAAGAAAGTAGCTCTAAGGGTCATTGCTGGGTGCCTATCAGAGGAAGAAATCATAGGATTGAAGAAGATGTTTAAAGGGATGGACACTGACAACAGTGGAACCATTACAATTGAAGAGCTGAAGCAAGGACTTTCAAAACAAGGGACTAAGTTGACAGAACAAGAAGTTAAGCAATTAATGGAAGCTGCTGATGCTGATGGTAATGGAACCATAGATTATGATGAGTTCATAACAGCAACAATGCACATGAACAGAATGAACAGAGAAGAACATGTCTATACAGCCTTCCAATACTTCGATAAAGACAATAGCGGGTACATTACTGTGGAAGAACTAGAGCAGGCTCTCCATGAATATAACATGCATGATGGCAGGGACATCAAGGAAATCATTGCAGAAGTTGATGCAGATAATGATGGTCGGATTAACTATGACGAGTTTGTAGCAATGATGTGTAAAGGAAACACAGAATCAGCTGTTACGAAGAAAAGGCGCGATTCATTGGTTTTATAG 1581 0.4244 MGNCCLGAKDNAPEDKGETNQNQQTRKNINNDSDSATTPPPSSSKPSKPSRPSPIGPVLGRPMEDVKSTYTIGKKLGKGQFGVTHLCTHKVTGKQYACKTIAKRKLVNKEELEDCRREVQIMHHLIGQPNIVELVGAFEDKQSVHLVMELCAGGELFDRIITKGHYTERAAASLLRTIVEIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDVVGTAYYIAPEVLKRKYGPEADIWSVGVLLYILLCGVPPFWAESETGIFKAILKGQVDFSSDPWPSISPQAKDLVRKMLNSNPKQRLTAHQVLNHPWIKEDGEAPDTPLDNIVLNRLKQFRAMNQFKKVALRVIAGCLSEEEIIGLKKMFKGMDTDNSGTITIEELKQGLSKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNREEHVYTAFQYFDKDNSGYITVEELEQALHEYNMHDGRDIKEIIAEVDADNDGRINYDEFVAMMCKGNTESAVTKKRRDSLVL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0135 526 Gene3D Transferase(Phosphotransferase) domain 1 156 343 - -
Lal22g0135 526 MobiDBLite consensus disorder prediction 42 56 - -
Lal22g0135 526 MobiDBLite consensus disorder prediction 17 41 - -
Lal22g0135 526 ProSitePatterns EF-hand calcium-binding domain. 491 503 IPR018247 -
Lal22g0135 526 ProSiteProfiles Protein kinase domain profile. 70 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0135 526 SMART efh_1 375 403 IPR002048 GO:0005509
Lal22g0135 526 SMART efh_1 482 510 IPR002048 GO:0005509
Lal22g0135 526 SMART efh_1 447 475 IPR002048 GO:0005509
Lal22g0135 526 SMART efh_1 411 439 IPR002048 GO:0005509
Lal22g0135 526 CDD EFh 376 435 IPR002048 GO:0005509
Lal22g0135 526 ProSiteProfiles EF-hand calcium-binding domain profile. 371 406 IPR002048 GO:0005509
Lal22g0135 526 Pfam EF-hand domain pair 376 436 IPR002048 GO:0005509
Lal22g0135 526 Pfam EF-hand domain pair 446 507 IPR002048 GO:0005509
Lal22g0135 526 ProSiteProfiles EF-hand calcium-binding domain profile. 482 513 IPR002048 GO:0005509
Lal22g0135 526 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 20 516 - -
Lal22g0135 526 ProSitePatterns EF-hand calcium-binding domain. 384 396 IPR018247 -
Lal22g0135 526 SUPERFAMILY EF-hand 368 508 IPR011992 -
Lal22g0135 526 Gene3D Phosphorylase Kinase; domain 1 71 155 - -
Lal22g0135 526 SUPERFAMILY Protein kinase-like (PK-like) 43 356 IPR011009 -
Lal22g0135 526 PANTHER SERINE/THREONINE-PROTEIN KINASE 20 516 - -
Lal22g0135 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Lal22g0135 526 ProSiteProfiles EF-hand calcium-binding domain profile. 443 478 IPR002048 GO:0005509
Lal22g0135 526 Pfam Protein kinase domain 70 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0135 526 Gene3D - 369 437 - -
Lal22g0135 526 ProSitePatterns Protein kinases ATP-binding region signature. 76 103 IPR017441 GO:0005524
Lal22g0135 526 ProSitePatterns EF-hand calcium-binding domain. 420 432 IPR018247 -
Lal22g0135 526 CDD STKc_CAMK 70 327 - -
Lal22g0135 526 Gene3D - 346 507 - -
Lal22g0135 526 ProSitePatterns EF-hand calcium-binding domain. 456 468 IPR018247 -
Lal22g0135 526 SMART serkin_6 70 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0135 526 MobiDBLite consensus disorder prediction 1 64 - -
Lal22g0135 526 ProSiteProfiles EF-hand calcium-binding domain profile. 407 442 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0135 Lal-Chr22 868552 872438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0135 1 522 EF-hand Containing Proteins AT5G12180 78.748 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal22g0135 Pkinase 9.3e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0135 K13412 - gmx:100820422 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0135 22 868552 872438 Lal22g0135 22 868552 872438 ECH