Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0105 ATGGCATCAGCAGTTTCCACACCTCTTGAAAGGCTTTCGAATTTGAAAAGCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACCGCTCTAGATTCATTCTCTTCTCATCCTATCTTCTCTGCATTCCTATCTCCTTCTTTCTCTTCAACCTCTTTCTCTTCCTCCGCTCTCTCCTCCGGTTCTCCCGCCTCCACCGCTGAAAATCTCCACCACGCTATTCGTCTCCTTGACAATCAGCTTCGCTCTGAAGTCCTTTCCCGTCATCACGACCTTCTCTCACAACTCTCTTCTCTTCATCACGCCGATCATGCTCTTTCTACTCTCCGTTCCTCTCTCTCTTCTCTCCAATCCTCCCTCCGCCGTCTCCGATCTGAACTCTCCACTCCCCTCCGCCATATCTCCTCCAACACAACCACCCTCTCTAACCTCCACCTCACCTCTGAGCTCATCAACCACTCCGTCCGTTTCCTCCGTCTCTCCAAAAAGCTCCGCGATCTCACCTCCGCTTCTGCCTCTGACCCTGAAAAACTCGATCTCGCTAAGGCCGCGCAGCTCTACTCTGAGATCTTGACTCTCTGTAACGAATTCGACCTAGCTGGTATAGATGCTGTTGACGAGGAGCTCAATTGGGTTAGGGAAACAGGGGATCGCTTGAGGAACGAGGCAATGAAGGTTCTGGAAAGAGGAATGGAAGGGTTGAACCAAGCAGAGGTTGGAACGGGGTTGCAGGTTTTCTATAACCTCGGTGAATTGAAGGGGACTGTGGAAGGTGTGGTTAATAAGTATAAGGGTTTGGGTGCCAAAAGTGTGACTGTGGCATTGGATATGAAAGCCATTTCTGGATCCGGTGGGAGCGGGTTTGGCCCTGGTGGAATTAGGGGTAGTGGGACGCCTCAGATTGGAGGAGGAGTTAAGGCCAGAGAAGCTTTGTGGCAGAGATTGGGGAATTGCATGGATCAGTTGCATTCCATTGCTGTCTCTGTCTGGCATTTGCAGAGGGTGCTATCCAAGAAACGGGATCCCTTTACACATGTTTTGCTGCTTGATGAGGTCATTCAGGAAGGTGATCCCATGCTAACAGATCGAGTTTGGGAGGCCGTTGCAAAGGCTTTTTCAACCCAAATGAAGTCTGCTTTTACAGCTTCGAGTTTTGTTAAAGAGATTTTTACAATGGGGTATCCAAAGCTTTACTCCATGATAGAGAATCTCCTTGACCGAATTTCACGTGACACAGATGTCAAAGGAGTTTTACCAGCAATTAATTCGGCTGGAAAAGAGCAGATAATTTCATCTGTTGAAATATTCCAGACTGCATTTTTGGCTCACTGCTTGAGTCGCCTTTCAGATCTAGTAAATTCTGTATTTCCAATGTCCAGCCGTGGAAGTGTTCCTTCCAAGGAACAAATATCAAAAATTATATCACGCATTCAGGAAGAGATAGAAGCTGTTCAGGTGGATGCACGTTTAACTCTTCTTGTTTTGCGTGAAATTGGCAAGGTTTTGCTGCTTCTTGCTGAACGAACTGAATACCAGATATCCACTGGCCCTGAATCACGTCAAGTGAGTGGTCCTGCCACACCAGCCCAGCTCAAGAATTTTACATTGTGTCAACACCTGCAAGATGTTCATACACGAATATCATTGATGCTTAAAGGAATGCCCAGTATTGCTTCAGATGTGTTGTCTGCTTCATTAGGTGCAATATATGGTGTTGCCTGTGACTCGGTAACATCTTTATTCCAGGCAATGCTTGATCGTCTTGAGTCTTGCATATTGCAAATACATGATCAGAACTTTGGAGTGCTTGGGATGGATGCTGCTATGGACAATAATGCATCACCTTACATGGAGGAGCTCCAGAAGTGTATTCTTCACTTCCGCAGTGAGTTTCTATCTAGGTTGTTGCCTTCCAGAAATACTACGGCCCCGGGGACAGAGAACATATGCACCAGGCTTGTCCAGAGTATGGCTTCACGGGTTCTAGTATTCTTCATCCGACATGCTTCTCTTGTTAGGCCACTTTCAGAATCTGGCAAATTGAGGATGGCTAGGGATATGGCTGAATTGGAGTTAGCTGTGGGTCAGAATCTGTTCCCTGTTGAGCAACTTGGTGCACCATATCGAGCACTTAGAGCATTCCGTCCACTTATTTTTTTGGAAACATCTCAGTTTGCATCATCTCCTCTTCTTCAAGATCTGCCACCAAATGTCATACTTCATCATCTGTATACACGTGGTCCTGAAGAATTGCAGTCACCACTGCAAAGAAACAAGCTAACACCACTGCAGTATTCATTGTGGCTAGATTCTCAAGGGGAAGATCAAATCTGGAAAGGCATCAAAGCAACACTTGATGATTATGCTGCAAATGTAAGGGGCAGAGGAGATAAGGAGTTTAGTCCTGTTTATCCTCTTCTGCTTCAATTGGGTTCATCATTGACTGAAAAGATTCAAGGTTCGTCCAAGTCTTGA 2472 0.4608 MASAVSTPLERLSNLKSPSSSSSSSSSTALDSFSSHPIFSAFLSPSFSSTSFSSSALSSGSPASTAENLHHAIRLLDNQLRSEVLSRHHDLLSQLSSLHHADHALSTLRSSLSSLQSSLRRLRSELSTPLRHISSNTTTLSNLHLTSELINHSVRFLRLSKKLRDLTSASASDPEKLDLAKAAQLYSEILTLCNEFDLAGIDAVDEELNWVRETGDRLRNEAMKVLERGMEGLNQAEVGTGLQVFYNLGELKGTVEGVVNKYKGLGAKSVTVALDMKAISGSGGSGFGPGGIRGSGTPQIGGGVKAREALWQRLGNCMDQLHSIAVSVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEAVAKAFSTQMKSAFTASSFVKEIFTMGYPKLYSMIENLLDRISRDTDVKGVLPAINSAGKEQIISSVEIFQTAFLAHCLSRLSDLVNSVFPMSSRGSVPSKEQISKIISRIQEEIEAVQVDARLTLLVLREIGKVLLLLAERTEYQISTGPESRQVSGPATPAQLKNFTLCQHLQDVHTRISLMLKGMPSIASDVLSASLGAIYGVACDSVTSLFQAMLDRLESCILQIHDQNFGVLGMDAAMDNNASPYMEELQKCILHFRSEFLSRLLPSRNTTAPGTENICTRLVQSMASRVLVFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQFASSPLLQDLPPNVILHHLYTRGPEELQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYAANVRGRGDKEFSPVYPLLLQLGSSLTEKIQGSSKS 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0105 823 MobiDBLite consensus disorder prediction 1 30 - -
Lal22g0105 823 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5 23 809 IPR019465 GO:0006891|GO:0017119
Lal22g0105 823 Pfam Golgi transport complex subunit 5 40 163 IPR019465 GO:0006891|GO:0017119
Lal22g0105 823 Coils Coil 105 125 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0105 K20292 - gmx:100806353 1299.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1247 18 15151932 15155090 Lal22g0105 22 645226 650302 LSH
Lal5g0968 5 11845751 11846449 Lal22g0105 22 645226 650302 PCT
Lal3g0687 3 5490683 5491444 Lal22g0105 22 645226 650302 PCT
Lal22g0105 22 645226 650302 Lal5g0968 5 11845751 11846449 PCT
Lal22g0105 22 645226 650302 Lal3g0687 3 5490683 5491444 PCT