Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0104 ATGTCATCTGGAAATTCTTTGAATGATGTGTTGTCAAAGAAGACATCAGTTTTTGGTTTGAAACGATGGGCTTTGATTGGCATAGGTGTTGGTGCATTTATAGTTCTGGTTCTTTGTGTATTATACATGTGGGTGATATTCCGGAGAAAGTCTAAGACTAGGAGATCTCGGGAGAAGTACTCTCTATCCCAAATACCAAATGTCTCAAAAGATATCAATGTTGACAAAGTTGGGGTGCAGGATTCTCATTTTCAACAAGAAAATGCATTTGATCCACTTCACTACAAGGCAAATGATAAGAATTCAGATAATGTATCTGTTCATTTGGGCATGATCAGATCCAGTGATTCTGATAATATAAGTCAATGCAGCTCAATTTATCATCATGAGAAAGGAAGTTCAATGTCGGGGGAAGAAAGAAGCTCAAGGAGTGTTAAGAAGCAGTATGCATTGCCGTATGGAGGGTTACTGACTGCTTCTCCTTTAAACGGCTTGCCTGAATTTTCTCATCTTGGATGGGGCCACTGGTTTACGCTTAGAGATCTGCAACAAGCAACCAATCGTTTCTCAGCAGACAACATTGTGGGTGAGGGTGGATATGGGGTTGTTTACAAAGGAAGACTGATCAATGGAACCGAGGTGGCAGTGAAGAAAATTCTTAACAACTTGGGACAAGCGGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATTGGTCATGTTAGACATAAAAATCTTGTGCGTCTGCTTGGATATTGCGTAGAAGGAGTTAATAGGATGCTGGTGTATGAATATGTGAACAACGGCAACTTAGAACAATGGTTACATGGAGCCATGCACAAACAAGGGATACTTACCTGGGAAGCCCGCATGAAAGTTATACTTGGCACAGCCAATGCGCTTGCTTACTTACATGAAGCCATAGAACCAAAAGTGGTTCACCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAGTTCAATGCAAAGGTTTCTGATTTTGGTTTGGCCAAACTTCTGGATTCAGGAGAAAGTCATATAACCACTAGAGTAATGGGAACATTTGGTTATGTGGCACCAGAATATGCTAACAGTGGTTTGTTAAATGAGAAGAGTGATATTTACAGCTTTGGCGTCCTCCTGATGGAAGCAATTACTGGAAGGGATCCTGTAGACTATGCACGTCCTACTAATGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTTGGGTTAAGGAGGGCTGAGGAAGTTGTGGACTCAAGCCTTGAAGTTAAACCTTCAATACGTGCGTTAAAGCGTGTCCTTCTGGTTGCACTTAAGTGTGTTGATCCTGATGCAGTTAAGAGGCCCAAAATGAGTCAGGTTGCAAGGATGCTTGAAGCTGACGAATATACAGTCCGAGAGGATAGAAGAAATAGAAGAAGCCGCACTGCCAGCATGGAAATCGAATCTGTGAAGGAATCTGGTCCACCTGATGCTGAATATGCGGAACATTAA 1500 0.4173 MSSGNSLNDVLSKKTSVFGLKRWALIGIGVGAFIVLVLCVLYMWVIFRRKSKTRRSREKYSLSQIPNVSKDINVDKVGVQDSHFQQENAFDPLHYKANDKNSDNVSVHLGMIRSSDSDNISQCSSIYHHEKGSSMSGEERSSRSVKKQYALPYGGLLTASPLNGLPEFSHLGWGHWFTLRDLQQATNRFSADNIVGEGGYGVVYKGRLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGVNRMLVYEYVNNGNLEQWLHGAMHKQGILTWEARMKVILGTANALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLMEAITGRDPVDYARPTNEVNLVEWLKMMVGLRRAEEVVDSSLEVKPSIRALKRVLLVALKCVDPDAVKRPKMSQVARMLEADEYTVREDRRNRRSRTASMEIESVKESGPPDAEYAEH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0104 499 MobiDBLite consensus disorder prediction 467 499 - -
Lal22g0104 499 CDD STKc_IRAK 195 461 - -
Lal22g0104 499 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
Lal22g0104 499 Pfam Protein kinase domain 191 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0104 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Lal22g0104 499 SMART serkin_6 189 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0104 499 ProSiteProfiles Protein kinase domain profile. 189 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0104 499 Gene3D Transferase(Phosphotransferase) domain 1 265 479 - -
Lal22g0104 499 PANTHER OS01G0323000 PROTEIN 2 498 - -
Lal22g0104 499 SUPERFAMILY Protein kinase-like (PK-like) 173 461 IPR011009 -
Lal22g0104 499 PANTHER RECEPTOR-LIKE KINASE PLANT 2 498 - -
Lal22g0104 499 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Lal22g0104 499 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0104 Lal-Chr22 637080 641770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0104 2 463 Trihelix Transcription Factor Family AT1G70460 39.232 9.14e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lal22g0104 Pkinase 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0104 - - gmx:100778444 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0104 22 637080 641770 Lal6g0398 6 2502820 2508502 LSH