Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0097 ATGCAGCAGCCAGATCACAGAAAAAAGAGTTCAACAGAGATGGAGTTCTTCTCGGAATATGGTGATGCCAACCGTTACAAAATTCAAGAAGTCATTGGGAAGGGAAGTTATGGTGTTGTTTGTTCAGCCATTGATACTCACACTGCTGAAAAAGTAGCAATAAAGAAGATTCATGATATATTTGAGCATATATCTGATGCTGCACGAATTCTTCGTGAGATAAAGTTGCTTAGACTTCTACGCCATCCCGACATTGTTGAAATTAAACACATTATGCTTCCTCCTTCTAGGAGGGACTTCAAAGATATTTACGTTGTTTTTGAGCTCATGGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACCTAACGAAAGAGCACTATCAGTTTTTTCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACTGGGAATGTCTATCATCGAGACTTAAAGCCAAAGAATATATTGGCGAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCTTTCAGTGACACACCAACTACTGTGTTTTGGACGGACTATGTTGCTACAAGGTGGTATAGAGCCCCAGAGCTCTGTGGATCATTTTACTCAAAGTATACACCAGCAATTGATATTTGGAGCATAGGTTGCATCTTCGCTGAAGTATTAATAGGAAAGCCACTTTTTCCTGGAAAAAATGTTGTCCACCAGTTAGATTTGATGACAGATCTGCTTGGGACTCCTTCACTGGATACTATATCCAGGGTACGCAATGATAAGGCGAGGAGATACCTAACCAGAATAAGGAAGAAGCAGCCTGTACCGTTTGCACAAAAATTTCCTAATGCTGATCCATTAGCGCTTCAACTACTGGAAAGGTTGCTTGCTTTTGATCCAAAAGACCGGCCTACTGCGGAAGAGGCATTAGGTGATCCTTACTTCAAGGGACTCTCAAGAGTTGAGAGGGAACCGTCCTGCCAGCCTATTACAAAAATGGAGTTTGAATTTGAAAGACGAAGAGTCACAAATGAAGAAATCCGAGAGCTGATTTTCCGTGAGATTCTAGAGTACCATCCTCAACTACTGAAAGACTACAAAAAAGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTCAAAAAGCAGTTTGCTCATCTTGAAGAAAATGGTGGTAAAAGCACTCCAGTGATACCACTTGAAAGAAAGCATGTATCACTTCCCAGGTCAACAATTGTACATTCGAATATGGTACAACCAAAGCAGAAATCCAATATTGCTTCCTCCAAAAACCGTCAAATAGCCGAAGAATATAATAGTAATCCCAGAGATACAGAAAATCCTGCAGCAAGGTCCATTCAGGGACTGCAAAGAATTACATTGGCAAAACCTGGTAAGGTTGTTGGGGCGGTTGTTCCATATGAGTATGCGAGTGTCGTCAAGGATTCTTATGTTCCAAGGAGATTTATAAGAGGTTCTGTTCTTCCTTCTCAATCTATACCCCGTACATATTATTATCAAAGATCTAGCTCTGGGAATCAAGAAAAGCCAGCAGCTACAGAAGCTGATAAGGGTGTGTCTCTACATGCAAAACATGGTCAACAGCAGTGTGGTGTCACTGCCAAAATAGCACCAGAAATAGATATTAATATTGACTCCAACCCCTTTTTTATGACAAGGGCCGGAGTGAACAAGATAGAACAGGATGATCGGATTGCAACGGAAACAAACTTGTCGCAGCCAAAGGCTCAATATGGTGGGATCAGTGCAGCTGCTCATAGAAAAGTTGGAGCTGTTCAGTATGGTATGGCAACAAGGATGTTGTAG 1845 0.4076 MQQPDHRKKSSTEMEFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTAEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTGNVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTRIRKKQPVPFAQKFPNADPLALQLLERLLAFDPKDRPTAEEALGDPYFKGLSRVEREPSCQPITKMEFEFERRRVTNEEIRELIFREILEYHPQLLKDYKKGTERTNFLYPSAVDQFKKQFAHLEENGGKSTPVIPLERKHVSLPRSTIVHSNMVQPKQKSNIASSKNRQIAEEYNSNPRDTENPAARSIQGLQRITLAKPGKVVGAVVPYEYASVVKDSYVPRRFIRGSVLPSQSIPRTYYYQRSSSGNQEKPAATEADKGVSLHAKHGQQQCGVTAKIAPEIDINIDSNPFFMTRAGVNKIEQDDRIATETNLSQPKAQYGGISAAAHRKVGAVQYGMATRML 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0097 614 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal22g0097 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 495 - -
Lal22g0097 614 ProSiteProfiles Protein kinase domain profile. 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0097 614 CDD STKc_TDY_MAPK 25 362 - -
Lal22g0097 614 Gene3D Phosphorylase Kinase; domain 1 41 363 - -
Lal22g0097 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 495 - -
Lal22g0097 614 SUPERFAMILY Protein kinase-like (PK-like) 22 321 IPR011009 -
Lal22g0097 614 SMART serkin_6 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0097 614 MobiDBLite consensus disorder prediction 428 454 - -
Lal22g0097 614 Gene3D Transferase(Phosphotransferase) domain 1 112 340 - -
Lal22g0097 614 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Lal22g0097 614 Pfam Protein kinase domain 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0097 Lal-Chr22 604376 609803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0097 1 431 MAP Kinase Gene Family AT2G42880 87.126 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal22g0097 Pkinase 1.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0097 - - gmx:100811788 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0097 22 604376 609803 Lal22g0097 22 604376 609803 ECH
Lal18g1535 18 17126740 17132693 Lal22g0097 22 604376 609803 LSH
Lal22g0097 22 604376 609803 Lal6g0101 6 616447 624547 LSH
Lal18g1535 18 17126740 17132693 Lal22g0097 22 604376 609803 PCT
Lal22g0097 22 604376 609803 Lal18g1535 18 17126740 17132693 PCT