Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0096 ATGCTCCCTCATCCTTTTCACAACTCTCTGCATGTCCTCCGTCGAAGCCGGAGGCTGTGGCGGAAAGATGCCACCACAGACCTGATGATGGTGCAGCATCAGATAAAGGAACAAGTTATGATGACTGTGAACGAGGATAATAATAATAATGCTAAAGGTTGTGTTTTGAAACAAGAAGAAGAAGAAGAGGGTTATGATAGAGAAGAGATAGAGAAGAAGATTCATGCATTGCAGAGGATTGTGCCTAATGGAGAGTCACTTGGTGTGGACAACCTTTTTGATGAAACTGCTGCTTATATAATGGCTTTGCAGTCTCAAGTCAAAGCCTTGAAAACTCTTTCTGGTTTCTTTGACAAGTTGGAGAAAGAGAAGACCAAGTTTGGAGGTTGA 390 0.4231 MLPHPFHNSLHVLRRSRRLWRKDATTDLMMVQHQIKEQVMMTVNEDNNNNAKGCVLKQEEEEEGYDREEIEKKIHALQRIVPNGESLGVDNLFDETAAYIMALQSQVKALKTLSGFFDKLEKEKTKFGG 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0096 129 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 67 112 IPR036638 GO:0046983
Lal22g0096 129 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 24 127 IPR044660 GO:0006355
Lal22g0096 129 CDD bHLH_AtIBH1_like 70 113 IPR044549 GO:0006355
Lal22g0096 129 PANTHER TRANSCRIPTION FACTOR PAR1 24 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0096 Lal-Chr22 600143 600532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0096 67 119 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 41.509 4.98e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0096 - - gmx:100817215 136.346