Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0090 ATGATTTGCACTGTGAAACAACCTGGAATAGTGATCCGAGGTTCTGGTCTTGTTTTCCGAGAAAAGGGTATAACAATTCCTCCAGTTCAATCATGTTCCCTTGTCTTAAGAGAAAAACCTCAGAGAAATCTGATTTCAGTGCAAAAGCCACTGCACCTTTCTTCTGTTGTTGGTGTTGGGAATCTTATTAAGCCCGTGAGATGTCAAAAAAGTGTTTTTGTGTGTGGAGCTTATGAGGCAGATAGATCAGAGGTTGAAGCAACTGAAGCTCCATCAGAGGCTGCTAAAAAGGTGAAAATTGGGATATATTTTGCAACATGGTGGGCTTTGAATGTTGTCTTCAATATTTATAACAAGAAGGTGTTGAATGCTTACCCTTACCCTTGGCTTACTTCAACTCTCTCACTTGCATGTGGCTCTCTTATGATGTTGATTTCATGGGCCACAAGGATTGCTGAGGCTCCTAAGACTGATCTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCACATACAATAGGGCATGTAGCTGCAACTGTTAGTATGTCAAAAGTTGCAGTATCATTCACCCATATTATCAAGAGTGGAGAACCTGCTTTCAGTGTTCTGGTTTCCAGATTTATATTGGGTGAAACCTTCCCAGTGCCAGTCTATCTGTCTTTAGTTCCAATCATTGGTGGATGTGCTCTTGCTGCTGTCACTGAGCTCAATTTCAACATGATTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTATTCCGTAATATCTTTTCAAAAAAGGGCATGAAGGGAAAGTCAGTGAGCGGAATGAATTACTATGCTTGTTTATCTATTTTGTCTCTGGTAATTCTCACACCATTTGCAATTGCCGTGGAGGGACCACAGATGTGGGCAGCTGGATATCAGACAGCCCTCTCTCAAATTGGACCCCAATTTTTATGGTGGGTGGCAGCTCAGAGCGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGGATATCTGTCATAGTTTCTTCAATCATTATCTTCCACACACCGGTTCAGCCCGTGAATGCTCTTGGAGCTGCTATTGCCGTCCTTGGAACCTTCTTGTATTCGCAGGCAAAGCAGTAG 1152 0.4236 MICTVKQPGIVIRGSGLVFREKGITIPPVQSCSLVLREKPQRNLISVQKPLHLSSVVGVGNLIKPVRCQKSVFVCGAYEADRSEVEATEAPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLVILTPFAIAVEGPQMWAAGYQTALSQIGPQFLWWVAAQSVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAVLGTFLYSQAKQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0090 383 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 99 382 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lal22g0090 383 PANTHER SOLUTE CARRIER FAMILY 35 33 382 - -
Lal22g0090 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 234 - -
Lal22g0090 383 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 33 382 - -
Lal22g0090 383 Pfam Triose-phosphate Transporter family 99 379 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0090 Lal-Chr22 558598 563198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0090 1 382 Antiporters AT5G54800 74.627 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0090 K15283 - gmx:100801832 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1548 18 17215962 17220464 Lal22g0090 22 558598 563198 ECH
Lal22g0090 22 558598 563198 Lal22g0090 22 558598 563198 ECH
Lal18g1548 18 17215962 17220464 Lal22g0090 22 558598 563198 LSH
Lal11g1031 11 13905485 13913352 Lal22g0090 22 558598 563198 PCT
Lal22g0090 22 558598 563198 Lal11g1031 11 13905485 13913352 PCT