Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0083 ATGGTAGAGTTGTCGCCATATGACCCAAAGCCATCTGCCATCTTGATCATGGAAGGAATTGTCGTGAGAAGAGTCATTCCCTCGGATAATAGTTGCCTCTTTAATGCAGTTGGATATGTTATGGATCATGATTCAAAAAAGGCTTCTGAGTTGAGACAGGTTATTGCTGCCACAGTAGCAAGTGATCCAGAGAAATATTCTGAAGCATTTCTGGGGAAGCCAAATGCAGAGTATTGTAATTGGATTCTTGACCCAGAGAAGTGGGGAGGTGCAATTGAACTTTCAATATTAGCAGACTATTGTGGACGTGAAATTGCAGCTTATGATATCCAGACAACACGATGTGATTTGTATGGCCAGGGAAAAAACTATTCTGAAAGAGTGATGCTGATTTATGATGGTCTCCACTACGACGCTTTAGCTATGTCTCCCTTTGATGGGGCTCCTGAGGAGTTTGATCAAACCATATTCGCTGTACAGGAAGACAGAACCATTGGACCTGTTGAGGGGCCTGCCCTTAATTTTGTGAAGGAGCAACAAAGGAAACGGAGTTACACCGACACCTCCAACTTTACTCTGCGCTGCGGGGTGTGTCAAATTGGAGTAATTGGTCAGAAGGAAGCAGTGGAGCACGCACAAGCAACTGGTCATGTTAACTTCCAAGAATATAGATGA 675 0.4385 MVELSPYDPKPSAILIMEGIVVRRVIPSDNSCLFNAVGYVMDHDSKKASELRQVIAATVASDPEKYSEAFLGKPNAEYCNWILDPEKWGGAIELSILADYCGREIAAYDIQTTRCDLYGQGKNYSERVMLIYDGLHYDALAMSPFDGAPEEFDQTIFAVQEDRTIGPVEGPALNFVKEQQRKRSYTDTSNFTLRCGVCQIGVIGQKEAVEHAQATGHVNFQEYR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0083 224 Pfam OTU-like cysteine protease 28 114 IPR003323 -
Lal22g0083 224 Gene3D - 8 189 - -
Lal22g0083 224 PANTHER UBIQUITIN THIOESTERASE OTU1 22 222 - -
Lal22g0083 224 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 22 222 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Lal22g0083 224 SUPERFAMILY Cysteine proteinases 22 140 IPR038765 -
Lal22g0083 224 ProSiteProfiles OTU domain profile. 21 143 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0083 Lal-Chr22 522551 525342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0083 17 224 C2H2 Transcription Factor Family AT1G50670 82.212 3.49e-131 366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0083 22 522551 525342 Lal22g0083 22 522551 525342 ECH
Lal22g0083 22 522551 525342 Lal6g0078 6 465711 469688 LSH