Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0062 ATGTCAGAGCTAGATAGGCAAATAGAGCGACTGAAGAAGTGTGAGGCATTGAAAGAGAGTGAAGTAAAAGCACTTTGTCTCAAAGCCATTGAAATTCTTGTCGAAGAGAGTAACGTTCAAAGGGTCGACGCCCCCGTCACGATTTGCGGAGATATACATGGTCAATTTTATGATATGAAAGAACTATTCAAAGTAGGAGGTGACTGCCCCAAAACTAATTATTTATTCCTTGGGGATTTTGTTGATAGAGGATATTACTCTGTTGAAACTTTTTTGCTTCTCCTTGCTCTTAAGGTGAGGTACCCAGATAGGATAACACTTATTAGGGGGAATCATGAAAGCCGTCAGATTACACAGGTATATGGATTCTATGACGAGTGCCTCCGAAAATATGGTTCAGCCAATGTTTGGAGATACTGTACTGATATATTCGACTACTTAAGCTTGTCTGCCCTTATCGAAAACAAGGTTTTCAGTGTTCATGGTGGTCTTTCTCCTGCCATTTCAACATTGGATCAGATACGAACTATTGACCGGAAGCAAGAAGTACCTCATGATGGTGCTATGTGTGACCTCCTATGGTCAGATCCTGAAGATATTGTGGATGGATGGGGTCTGAGTCCCCGTGGTGCTGGTTTCTTATTTGGTGGCAGTGTTGTTACTTCTTTTAATCACTCCAATAATATTGACTATATATGCCGTGCTCACCAGTTGGTGATGGAAGGATATAAGTGGATGTTCAATAACCAGATAGTTACTGTCTGGTCAGCTCCAAATTACTGCTACAGATGCGGTAATGTAGCTGCAATTCTGGAGTTGGATGGAAATCTTAATAAGCAGTTCCGGGTGTTTGATGCTGCTCCACAGGAATCAAGAGGGGCGCCTGTGAAGAAACCAGCACCAGACTACTTCCTATGA 918 0.4227 MSELDRQIERLKKCEALKESEVKALCLKAIEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTDIFDYLSLSALIENKVFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDGNLNKQFRVFDAAPQESRGAPVKKPAPDYFL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0062 305 Pfam Calcineurin-like phosphoesterase 45 237 IPR004843 GO:0016787
Lal22g0062 305 PRINTS Serine/threonine phosphatase family signature 45 72 IPR006186 GO:0016787
Lal22g0062 305 PRINTS Serine/threonine phosphatase family signature 74 101 IPR006186 GO:0016787
Lal22g0062 305 PRINTS Serine/threonine phosphatase family signature 107 131 IPR006186 GO:0016787
Lal22g0062 305 PRINTS Serine/threonine phosphatase family signature 142 168 IPR006186 GO:0016787
Lal22g0062 305 PRINTS Serine/threonine phosphatase family signature 171 198 IPR006186 GO:0016787
Lal22g0062 305 PRINTS Serine/threonine phosphatase family signature 228 248 IPR006186 GO:0016787
Lal22g0062 305 PRINTS Serine/threonine phosphatase family signature 250 266 IPR006186 GO:0016787
Lal22g0062 305 SUPERFAMILY Metallo-dependent phosphatases 3 291 IPR029052 -
Lal22g0062 305 ProSitePatterns Serine/threonine specific protein phosphatases signature. 108 113 IPR006186 GO:0016787
Lal22g0062 305 Gene3D - 1 305 IPR029052 -
Lal22g0062 305 SMART pp2a_7 17 288 IPR006186 GO:0016787
Lal22g0062 305 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 305 - -
Lal22g0062 305 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP-X ISOZYME 1 1 305 - -
Lal22g0062 305 CDD MPP_PP2A_PP4_PP6 3 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0062 Lal-Chr22 379509 383908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0062 24 223 Calmodulin-binding Proteins AT5G63870 37.603 7.26e-37 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0062 22 379509 383908 Lal22g0062 22 379509 383908 ECH
Lal22g0062 22 379509 383908 Lal6g0059 6 354177 358062 LSH