Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0057 ATGTTGTCTGTTTCCAACATGCAATCTCTCACCCACTTTCTCCTTAAACCCATTTTCCTTCATACGTTAAATGCTTCCTTTCATCTACTCTTACTACTTGTAGTTTTAGTGTCATTGCTTTGGAATAAATTCTCAGCAGGAGTTAGACATCATGACTCTAAAGAGAAATCCAATTTTACCCTTTCCAAAAAGTCCTTTTTTTGTTCTCTGGGTGCTTCTGTTTTTAATCTTATTCTCTTTCTTTTTAATTTCTTCTATTGGTATACAAGTGGTTGGTCAGAAGAAAAGGTTTTGACCCTTCTGGATTTAGCACTCAAAACAGTTGCTTGGGGTGTTGTTTCTATTTGCTTGCATAAGCAATTCTTCTTATTATGTTCAGGTGAAAGAAGATTTTCGTCATTCTTCATAACCTGGTGTGTTTTCTATCTCTTTATTTCATGTTTTTATTTCGTAGTGGACGTGGTTCATCTCTATGAAAAACATGTTTTGTTACCAGCTCAGTACTTGGTTTCTGATGTGGTATCCACTTTAGTTGGGTTACTCTTCTGTTACATGAGCTACTTTGTGAAAAATGAAGGTGAAGATAGTAGTACGCTTTTGGAACCTCTTTTAAATGGCCATAGTGATAATAATGTTAGCAATGGTTTAGGGTCAAAAGAGACCAAGGGTGATGCCACTGTTACCCCTTTCTCAAATGCTGGATTTTTCAGCATTCTCACCTTCTCTTGGGCGGGTCCTCTTGTAGCTGCTGGCAATAAGAAGACCTTGGACCTTGAGGATATCCCCCAACTTGACAGTAGGGATAGTGTAGTTGGACCTTTTCCAAATTTTAGAGATAAGCTAGAGGAAGATTGTGGTGCAATTAACAGTGTGACCACATTTAAGCTGGTGAAGTCATTAGTTTTCTCAGCATGGAAAGATATTCTTTTCACAGCTTTTCTTGCATTATTGAACACACTGGCTTCTTATGTTGGTCCCTACCTTATTGATTCTTTTGTGCAATATCTTGATGGACAACGGCTATTTGAGAATCAGGGGTACGTATTGGTTTCTGCATTCTTTTTCGCAAAGATTATAGAGTGCCTCTCGCAAAGGCATTGGTTCTTTAGGCTGCAGCAAGTTGGAATTCGAATCCGAGCGCTACTTGTGACAATGATTTATAATAAAGCCTTGAAACTTTCAGGTCAATCAAGACAGGGCCACACTTCTGGGGAAATAATCAATTTCATGTCTGTTGATGCTGAAAGAATTGGGGATTTCAGTTGGTACATGCATGATTTGTGGATGGTAGTTCTGCAAGTTACGCTGGCCTTGTTGATTTTGTATAAAAACCTTGGGCTTGCTTCAATTGCTGCTTTTGTTACAACTATCCTTGTAATGTTGGCAAATGCTCCCTTGGGATTATTGCAAGAGAAGTTTCAAAGTAAGTTGATGGAGTCAAAAGATACAAGAATGAAGACAACATCAGAGATTTTAAGGAATATGAAGATCCTCAAACTACAAGGATGGGAAATCAAGTTTCTGTCTAAGATAAATGTGCTCAGAAACACTGAGCAAGGCTGGTTACAAAAATATCTTTATACTTCAGCCATGACTACATTTTTGTTTTGGGGTGCCCCTACACTTGTCTCTGTAGTTACTTTTGGTACTTGTATGCTTATAGGGATTCCACTCGAATCAGGGAAGATCTTGTCTGCACTTGCAACATTCAGGATTCTTCAAGAGCCCATTTATAATCTTCCGGAAACAATTTCAATGGTTGTACAAACTAAGGTTTCTCTTGATAGGATTTCATCATTCCTTTGTCTTCAGGACTTGCAGTCTGATGCTGTAGAGAGGCTTCTTCCGGGTAGTTCAGATACAGCAATTGAAATAGTTGGTGGAAATTTCTCGTGGGATATAACTTCCTCGAATACAACACTGAAAAACATAAATCTTGCAGTTTCTCACGGCATGAGGGTTGCTGTTTGTGGCACTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTATGTTGGGAGAAGTACCAAAGATATCAGGAATCCTGAAGGTGTGTGGATCAAAGGCATATGTTGCTCAATCACCATGGGTACAAAGTGGCAAGATAGAGGATAATATATTGTTTGGTAAGGAGATGGATAGGGAATGGTATGAGAAGGTACTTGAAGCCTGTTCCCTCAAAAAGGATCTGGATATTTTACCATTTGGTGATCAAACAGTTATAGGAGAGCGTGGAATAAATTTGAGTGGGGGACAAAAGCAAAGAGTACAAATTGCACGTGCTCTTTACCGAGATGCTGATATATATTTGTTTGATGATCCTTTTAGTGCTTTGGATGCTCATACAGGATCTCACCTCTTCGAGGAATGCTTGCTGGACCTTTTAAGTTCAAAGACTGTGGTTTATGTCACTCACCAAGTAGAGTTCTTACCTGCTGCTGACCTTATATTGGTCATGAAGGATGGGAAAATTACTCAATGTGGGAAGTATGCTGATCTGCTTAACAGTGGGACTGATTTTATGGAACTTGTTGGTGCACATCAACAAGCCATGTCTGCACTTAATTCGCTAGATAGAAGGACAGAATCTATAATTACATTGGAGCCAGATGTGAATGCCTTTGGTGCTCTTGATGTTAAAGAAAAAGATGCAAACAAAGACATGCAAAATGGTAAAACAGATGACACAAGTGAGCCATCAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGCTTTCAGTCTATTGGAATTATATCACAACGGCATTCGGAGGAGCTCTTGTTCCGTTAATATTGTTGTCTCAGACTATCTTTCAAGCTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCCATCTCATCGGATGTGGAGCCACCCGTTCGAGGAACGACTCTTATAGCAGTCTATGTTGGTTTGTCCATTGGAAGTTCTTTCTGCATCCTTGCCAGAGAAATGTTTGTTGTCATAGCTGGTTATAAGACAGCTACTATACTCTTTAGTAAGATGCACCACTCCATTTTCCGTGCCGCGATGTCATTTTTCGATTCCACTCCAAGTGGACGAATCCTTAATAGAGCTTCTACTGACCAAAGTGCAGTGGATACAGACATTCCTATTCAAATTGGTTCATTTGCTTTCTCATTTATCCAGCTTTTGGGAATTATAGCAGTGATGTCTCAGGTTGCATGGCAAGTCTTCATTGTCTTTATACCTGTGATAGCAATCAGCATCTGGTATCAGCAATATTATATACCATCAGCAAGAGAACTATCACGTTTAGTTGGAGTGTGCAAAGCCCCAATCATTCAACACTTCGCTGAAACAATTTCTGGTACATCAACTATTAGAAGCTTTGATCAGCAGTCAAAATTTCAGGAATCAAATATGAAATTGACTGATGGATATTCTCGGCCGAAGTTCAATATTGCTGGTGCCATGGAGTGGTTGTGCTTCCGCCTAGATATGTTGTCTTCTATCACATTTGCCTTTTGCTTGATGTTATTGATATCTATTCCGCAGGGAGTAATAGATCCAGGCATTTCTGGTTTAGCTGTTACCTATGGACTTAATTTGAATGCAATACAAGCTTGGATGATATGGAACCTTTGCAACTTGGAGAACAAAATTATATCAGTAGAAAGAATACTACAATATACTAGCATTCCTAGTGAGCCTTCCCTTGTTGTTGAAGAAAGTCGACCAGACCCCTCTTGGCCATCTTATGGCGAGGTTGATATACATGACTTGCAGGTTCGTTATGCGCCACATCTCCCACTTGTGTTGCGTGGGCTCACATGCACATTTCGTGGAGGACTGAAAACTGGCATTGTTGGGAGAACTGGAAGCGGTAAATCAACTCTCATACAAACACTTTTCCGACTCGTTGAACCTACTGCTGGGCGAGTTATGATTGATAGCATCAACATCTCTTCCATTGGACTTCATGATTTGAGGTCTAGACTAAGTATTATTCCTCAGGACCCAACCATGTTTGAGGGGACGGTGAGGAATAATCTAGACCCACTGGAAGAGTACTCGGATGAACAAATTTGGGAGGCCCTAGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTAGACTCTGCGGTTAGTGAGAATGGTGAGAACTGGAGTATGGGTCAGAGGCAGTTGGTATGCCTTGGTAGGGTGCTGCTTAAGAAAAGCAAGGTTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACATCTACAGATAATTTGATTCAGCAAACTCTTAGGAAACATTTCTCTAACTCTACAGTCATTACCATTGCACATCGAATAACTTCTGTTCTTGATGGCGATATGGTTTTGCTTCTTAGTCAAGGACTTATTGAGGAGTATGGGTCTCCAACAACATTGCTAGAGGATAAATCATCATCTTTTGCTGAACTTGTTGGAGAGTATACCATGAGGTCTACCTCTAGTTTTGAGAAATCTGTTGATCACTGA 4506 0.4008 MLSVSNMQSLTHFLLKPIFLHTLNASFHLLLLLVVLVSLLWNKFSAGVRHHDSKEKSNFTLSKKSFFCSLGASVFNLILFLFNFFYWYTSGWSEEKVLTLLDLALKTVAWGVVSICLHKQFFLLCSGERRFSSFFITWCVFYLFISCFYFVVDVVHLYEKHVLLPAQYLVSDVVSTLVGLLFCYMSYFVKNEGEDSSTLLEPLLNGHSDNNVSNGLGSKETKGDATVTPFSNAGFFSILTFSWAGPLVAAGNKKTLDLEDIPQLDSRDSVVGPFPNFRDKLEEDCGAINSVTTFKLVKSLVFSAWKDILFTAFLALLNTLASYVGPYLIDSFVQYLDGQRLFENQGYVLVSAFFFAKIIECLSQRHWFFRLQQVGIRIRALLVTMIYNKALKLSGQSRQGHTSGEIINFMSVDAERIGDFSWYMHDLWMVVLQVTLALLILYKNLGLASIAAFVTTILVMLANAPLGLLQEKFQSKLMESKDTRMKTTSEILRNMKILKLQGWEIKFLSKINVLRNTEQGWLQKYLYTSAMTTFLFWGAPTLVSVVTFGTCMLIGIPLESGKILSALATFRILQEPIYNLPETISMVVQTKVSLDRISSFLCLQDLQSDAVERLLPGSSDTAIEIVGGNFSWDITSSNTTLKNINLAVSHGMRVAVCGTVGSGKSTLLSCMLGEVPKISGILKVCGSKAYVAQSPWVQSGKIEDNILFGKEMDREWYEKVLEACSLKKDLDILPFGDQTVIGERGINLSGGQKQRVQIARALYRDADIYLFDDPFSALDAHTGSHLFEECLLDLLSSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKYADLLNSGTDFMELVGAHQQAMSALNSLDRRTESIITLEPDVNAFGALDVKEKDANKDMQNGKTDDTSEPSGQLVQEEEREKGKVGLSVYWNYITTAFGGALVPLILLSQTIFQALQIGSNYWMAWATPISSDVEPPVRGTTLIAVYVGLSIGSSFCILAREMFVVIAGYKTATILFSKMHHSIFRAAMSFFDSTPSGRILNRASTDQSAVDTDIPIQIGSFAFSFIQLLGIIAVMSQVAWQVFIVFIPVIAISIWYQQYYIPSARELSRLVGVCKAPIIQHFAETISGTSTIRSFDQQSKFQESNMKLTDGYSRPKFNIAGAMEWLCFRLDMLSSITFAFCLMLLISIPQGVIDPGISGLAVTYGLNLNAIQAWMIWNLCNLENKIISVERILQYTSIPSEPSLVVEESRPDPSWPSYGEVDIHDLQVRYAPHLPLVLRGLTCTFRGGLKTGIVGRTGSGKSTLIQTLFRLVEPTAGRVMIDSINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYSDEQIWEALDKCQLGDEVRKKEGKLDSAVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTSTDNLIQQTLRKHFSNSTVITIAHRITSVLDGDMVLLLSQGLIEEYGSPTTLLEDKSSSFAELVGEYTMRSTSSFEKSVDH 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0057 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1253 1485 IPR003439 GO:0005524
Lal22g0057 1501 SUPERFAMILY ABC transporter transmembrane region 298 597 IPR036640 GO:0005524|GO:0016021
Lal22g0057 1501 CDD ABCC_MRP_domain2 1249 1469 - -
Lal22g0057 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 845 IPR027417 -
Lal22g0057 1501 CDD ABCC_MRP_domain1 623 823 - -
Lal22g0057 1501 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524
Lal22g0057 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1243 1482 IPR027417 -
Lal22g0057 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal22g0057 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 846 IPR003439 GO:0005524
Lal22g0057 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 934 1214 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal22g0057 1501 SUPERFAMILY ABC transporter transmembrane region 933 1231 IPR036640 GO:0005524|GO:0016021
Lal22g0057 1501 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 99 1497 - -
Lal22g0057 1501 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 99 1497 - -
Lal22g0057 1501 Gene3D - 1234 1486 IPR027417 -
Lal22g0057 1501 Pfam ABC transporter 641 775 IPR003439 GO:0005524
Lal22g0057 1501 Pfam ABC transporter 1269 1416 IPR003439 GO:0005524
Lal22g0057 1501 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Lal22g0057 1501 CDD ABC_6TM_ABCC_D2 932 1226 IPR044726 GO:0140359
Lal22g0057 1501 Pfam ABC transporter transmembrane region 309 576 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal22g0057 1501 Pfam ABC transporter transmembrane region 934 1175 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal22g0057 1501 MobiDBLite consensus disorder prediction 884 907 - -
Lal22g0057 1501 Gene3D - 607 864 IPR027417 -
Lal22g0057 1501 SMART AAA_5 650 823 IPR003593 -
Lal22g0057 1501 SMART AAA_5 1277 1469 IPR003593 -
Lal22g0057 1501 Gene3D ABC transporter type 1, transmembrane domain 896 1232 IPR036640 GO:0005524|GO:0016021
Lal22g0057 1501 Gene3D ABC transporter type 1, transmembrane domain 287 605 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0057 Lal-Chr22 341954 348071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0057 623 863 Calmodulin-binding Proteins AT2G36910 29.885 3.13e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0057 - K05666 gmx:100777836 2387.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0057 22 341954 348071 Lal22g0057 22 341954 348071 ECH
Lal22g0057 22 341954 348071 Lal6g0041 6 276924 284621 LSH