Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0051 ATGCTATTTTCCAAGTGTCAAACCATGAAGATGTGGTTGCTGTCTTATAGAGTTGTAATAGTCTTGTGTGTTATGAATTTCATGATGTGGGCTCAGGTGGATTTAGCAGAAGGTGGTGCTAGGAATTATATTAGTTGGGATGATTTGAAAGTTGATGAACAAAGATTGGCATTGAAGACCAATAATGAGATTAAAGTTATTGTGGTTGATCAGTATGGAAGGGGACATTCAAAAACTGTTCAAGGAGCAGTGGATATGGTTCCAGATTACAACAATCAAAGGGTCAAAATATACATATATCCTGGAGTTTACAGAGAGAAGGTGCTTGTGCCAAACAACAAGCCTTATATTTCATTTATAGGCAAAAGAAATGAAACATCAGGTGCTGTTATTACTTGGAACAGTAAGTCATCAGATAGAGGTCCAGATGGCCAAACATTAGGCACTTATGGTTCTGCAACTGTAGGAATAGAATCTGATTATTTTTGTGCAACTCAGATCACTTTTGAGAACTCAGTAGTTGCAGCACCTGGTGGAATTGGAATGCAAGCAGTGGCATTGAGGGTAAACAGTAATAGAGCCATGTTCTATAGAGTTAAGATCAAAGGAACACAAGACACCCTCTTAGACAACTCAGGAACACATTACTTCTTCAGGTGTCTCATCCAAGGGAAAGTAGATTTTATCTTTGGCAATGCAAAATCACTATATGAGAAATGCCATCTTGAATCAATAGCTGAAAACTATGGAGCTATAGCTGCACATCATAGGAATTCACCACATGAAGATACAGGGTTTTCATTTGTAGGATGCAGGATTAGAGGAAGTGGAAATGTGTATCTTGGTAGAGCATGGGGTGACTACTCAAGAATAATATATTGTAATACTTATATGGATGATATTATTAATCCAGCAGGGTGGTCAGACTGGAATCATCCAGAAAGAAAGTGGACTGCAGTGTTTGGTGAGTATGAAAGTGAAGGAAGAGGAGCAGATAGAAGACATAGGGTGCCTTGGTCAAAATCATTCAGTTATGAGCAAGCAAAGCCTTTCCTGGATAAGAGATTTATAGATGGAGATCAGTGGCTTAGACTCTAG 1098 0.3862 MLFSKCQTMKMWLLSYRVVIVLCVMNFMMWAQVDLAEGGARNYISWDDLKVDEQRLALKTNNEIKVIVVDQYGRGHSKTVQGAVDMVPDYNNQRVKIYIYPGVYREKVLVPNNKPYISFIGKRNETSGAVITWNSKSSDRGPDGQTLGTYGSATVGIESDYFCATQITFENSVVAAPGGIGMQAVALRVNSNRAMFYRVKIKGTQDTLLDNSGTHYFFRCLIQGKVDFIFGNAKSLYEKCHLESIAENYGAIAAHHRNSPHEDTGFSFVGCRIRGSGNVYLGRAWGDYSRIIYCNTYMDDIINPAGWSDWNHPERKWTAVFGEYESEGRGADRRHRVPWSKSFSYEQAKPFLDKRFIDGDQWLRL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0051 365 Gene3D - 64 365 IPR012334 -
Lal22g0051 365 PANTHER PECTINESTERASE QRT1 22 365 - -
Lal22g0051 365 Pfam Pectinesterase 67 360 IPR000070 GO:0030599|GO:0042545
Lal22g0051 365 SUPERFAMILY Pectin lyase-like 66 363 IPR011050 -
Lal22g0051 365 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 22 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0051 Lal-Chr22 305836 310905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0051 41 316 Carbohydrate Esterase AT5G55590 58.784 2.96e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0051 K01051 - gmx:100813382 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0051 22 305836 310905 Lal22g0051 22 305836 310905 ECH