Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0050 ATGACTGTAAGCTGTCGCCGTTTTGTGGAATGGAAAGAGCAGTTTGTGTCACAGGAGCGTGGCAACCGTGTCGTCCACTATTACCTGAAGGATTCTGATGGGGAATCCGTGCTTGCGGTTGTGGGCACTGAGAGGAGTCTTAGACACATGTTCTATGTTGTTTCTGAGGAGTTCCTTGAGATTTATGCAAAGGACGGTTCTGTTTCAGCTGGTTTTAAATGGAGGTCTAGAAGAGAGGTGGTAGATTGGCTGACATCAACATTATCAAAGCAGTATCTGTCCGGAGATAGAAATTTGTCACCTGGTCATAATGTGGCACAAGCTCACGAGGCCACAGATAGCATCAATGAAGTTGGTGCTCTGCCTACACAAATAACAGATGATAAGGGTCTTATAATAAGTAATTCTGAAGTGCAGAATTCGGACATTGTTTGGTCAGGAGTGCCATGGACATGTGGCAAACAACTTAAGCACTATCCTGCTTTTTCCAGGAATGGGATCAAAATTGCAATTCAATCTTTCATTTTTGTCATGGCCAAGGGAGAGAATCATTACATTGCCTATTTGGAGGATATGTATGAAGACAAGAGGGGCCAGAAAAAGGTTAGGGTGAGGTGGTTTCACCATAATCAAGAAGTCAAAGGTGTAAATCTTGTGCGAAATCCTCACCCTAGGGAAATTTTTATCACGCCTTATTCTCAAGTTATTAGTGCAGAGTGTGTTGATGGTCCTGCCACAGTGTTAACTCGTGACCATTATTTAAAATGCTTGCCTTCTTTTTGCCCTACTTCAATGGACAAAATACATTTGTGCTTTAGGCAATTTAGAAGCAACAAAGTGAAGCCTTTTGACTTGAGTAAACTGCGTGGCTACTATGATCAACCAATTCTCTCTTGTTTGCACCATGATTCCTTCCAAAACCCAGAGCCTAATAGTGTTGCTGAAGATGAAGAATTTAACATGGGTGATGATGTGAAGCTGGGAGCTAAGAGGGCCAGAAGTGGTAGGGGGTCTCCTCAGTCTTGGATAGATCACCAGGGAGTTAGAAAGTTAGTTAGAAGTCAGCAAATGATGGTTTACAAAACCTTCCAGGATGCAAATTACGCTCAACCAGATAGACGGTTGCTTTCACTGAAGAAGGTTGATTGTCAACCTTTGTATAACCCCACATATAAGATTGATGACAAGATAGAGTTTCTCTGTCATGACAGTGGCATTAGAGGCTGTTGGTTCAGGTGTACAGTTGTGCAGATATCTCGGAAACTGTTGAAAGTCCAATATGATGATTTGCAGGATGAGGATGGAAGCGGAAATCTTGAGGAATGGATTCCTACTTACAAATTGGCCATGCCTGATAAACTTGAGATGAGACATTCTGGTCGGCCAACCATCAGGCCAGCCCCGACTTATGTGGAACAAGAACTTGCTATTGATGTTGGAACTGCAGTTGATGCATGGTGGAGCGATGGCTGGTGGGAGGGAGTTATATGTGGAATTGATAATTGTGGTGAAGGTTTGCTAATGAAAGTGTGTAAGAAGGATCTAAGAATATCAAGAGATTGGTTGGGGGACCACTGGGTTGATATTAAGGCAAAGCCTGATATAACCTCAACTTTACTCACAGTTAATAGTTTTTACACAAAGATTTCCGTGTCCCTGTCTATAGCTAAAGATGCTGACTCTGTTGGTTTTGCTAATTCATGTCATGATGTTCGTGTTGATAACAAGTCTAATGAACCAGATATTGTTGAAGAGAAACTTGTGTGCTGCAAGGGTATTGCTGAAGATGTGGATCGGGTTCATGATAATAACCCCCCTTCAAAAAAGTGTGCTGAAGGTGGTAATATTGAGATACATGATTGTTCTAACAATGATAACAATGGTGAGGGTGATGGCCAGGACAATACTGATGATGATAATAACCAAGATTTTGATAATGATGATAGAGATATGGTGGTGTTAGGGACTTCTGGTAAGGACTCTGAAGGTGCAGAACCAATGGAAATGGCTGTATAA 2016 0.4191 MTVSCRRFVEWKEQFVSQERGNRVVHYYLKDSDGESVLAVVGTERSLRHMFYVVSEEFLEIYAKDGSVSAGFKWRSRREVVDWLTSTLSKQYLSGDRNLSPGHNVAQAHEATDSINEVGALPTQITDDKGLIISNSEVQNSDIVWSGVPWTCGKQLKHYPAFSRNGIKIAIQSFIFVMAKGENHYIAYLEDMYEDKRGQKKVRVRWFHHNQEVKGVNLVRNPHPREIFITPYSQVISAECVDGPATVLTRDHYLKCLPSFCPTSMDKIHLCFRQFRSNKVKPFDLSKLRGYYDQPILSCLHHDSFQNPEPNSVAEDEEFNMGDDVKLGAKRARSGRGSPQSWIDHQGVRKLVRSQQMMVYKTFQDANYAQPDRRLLSLKKVDCQPLYNPTYKIDDKIEFLCHDSGIRGCWFRCTVVQISRKLLKVQYDDLQDEDGSGNLEEWIPTYKLAMPDKLEMRHSGRPTIRPAPTYVEQELAIDVGTAVDAWWSDGWWEGVICGIDNCGEGLLMKVCKKDLRISRDWLGDHWVDIKAKPDITSTLLTVNSFYTKISVSLSIAKDADSVGFANSCHDVRVDNKSNEPDIVEEKLVCCKGIAEDVDRVHDNNPPSKKCAEGGNIEIHDCSNNDNNGEGDGQDNTDDDNNQDFDNDDRDMVVLGTSGKDSEGAEPMEMAV 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0050 671 Pfam Agenet domain 394 468 IPR008395 -
Lal22g0050 671 SMART agenet_At_2 475 523 IPR014002 -
Lal22g0050 671 SMART agenet_At_2 389 454 IPR014002 -
Lal22g0050 671 PANTHER OS07G0607300 PROTEIN 5 640 - -
Lal22g0050 671 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 640 - -
Lal22g0050 671 ProSiteProfiles BAH domain profile. 167 286 IPR001025 GO:0003682
Lal22g0050 671 MobiDBLite consensus disorder prediction 621 671 - -
Lal22g0050 671 SMART BAH_4 167 286 IPR001025 GO:0003682
Lal22g0050 671 Pfam BAH domain 175 258 IPR001025 GO:0003682
Lal22g0050 671 Gene3D - 135 286 IPR043151 -
Lal22g0050 671 MobiDBLite consensus disorder prediction 631 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0050 Lal-Chr22 303370 308313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0050 403 521 PHD Transcription Factor Family AT5G58610 28.788 8.23e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0050 - - gmx:100306240 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0050 22 303370 308313 Lal22g0050 22 303370 308313 ECH