Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0031 ATGTCACTGAGTCGAAGGCTTTCTTCTTCAAATGGGAAATTGCAACAAAGTATGAAGTTTTTTAAAGGAAATGAGCCTTTGCATCGGTCTAATTCTGATAGCACATGTAGAAGGAAGCCTTTGCTTCTCTTGATTTTTGGTCTTGTTGCTATTGGAAGTGCTTGGTTTTTGTTGAGTTTCAATACTAAGTGTTTGATGAGCAAGGAGAATGAAGCAGCTTGTGGAGGGAGAGCAAGAATCTTGTTACATCGTTATAATATCATCAAGAAGCAGCTTCACGCTCAGAACACTATGCAATCATGGAAACTACGACTATGTGAAATTAAGGATTTCATTAGTTTATCAAATTTGGTTAAAGGATTCTGGTGGGGCCTTATAGGAATTGTGATGTCCTACAAGTTGTCTGGCTTCTGTTTATCATGGAGGAGCCAAAAGCATAAGATAGTGAAGGACCATCCGGTTGCTCAGAAAAAGAAGCTGCAACATTTTGTTTGGGGTCCTTCAAAGAGTGCTGGGAGGTGGAGGAAAAAGTTTCTAGTTATATTTGTATCACTTGGAATAATTGCGTCCATTTGGTTATTCTGGCACCTAAATATGAACATTATGCAGAGACGGGAACACTTGCTTGCTAATATGTGTGATGAGCGAGCCCGTATGCTGCAAGATCAGTTCAATGTGAGCATGAACCACGTTCACGCCCTGGCTATTCTTGTATCTACCTTTCACCATGATAAACATCCTTCTGCAATCAACCAGAAAATTTTTGGGGAATATACAGAGAGTACAGCATTTGAGAGACCACTTACTAGCGGGGTTGCTTATGCTATGAAAGTTCTCCATTCTGACAGGATGCATTTTGAGAGGCAGCACGGGTGGACAATTAAAAAAATGGAAACCGAGAATGAAGCACTAGTCCAAGATTGTATTCCAGAAAATTTGGATCCGGCTCCCTTTCAAGATGAATATGCACCAGTCATATTTGCTCAAGAAACAGTTTCCCATATTGTATCTATTGGCATGATGTCAGGGAAGGAGGACGGAGAAAATATTTTAAGGGCAAGGGCATCAGGAAAGGGAGTTCTGACATCTCCATTTAAACTACTGAAGTCCAATCAAGAGGGGGGATGTGTTATAACACTAACCTTCCTCCAAATGCTACATCGGAGCAGTGTATTGAAGCTACTGTGGGGTGCATCTTATGATGTTCCATCACTGGTGGACAAGCTTTTGCACCAACTTGCCAGCAAACAAACCATTGCTGTCAATGTTTATGATACAACTAATGCATCTGCGTCTATCACAATGTATGGTACTGATGTTGTTGACACTGGCCTACTACATATAAGTCGCCTAGATTTTGGGGATCCGCTACGAAAGCATCAGATGCACTGCAGGTTCAAGCAGAGGCCTCCATTACCTTGGACAGCAATAAATGCATCAGTGAGGGTGCTTGTTATTACTTTACTTCTTGGTCATATTTTTTATGCAGCAATAGATCGCATAGCAAAAGTGGAGGATGACTATCGTGAAATGAGGGAGCTCAAAGTTCGCGCTGAAGCTGCAGATGTGGCAAAATCTCAGTTGTTCAAAATTGATAGTCCTGTCTTGACCTTAAAGGGTTTGGTTTCTCATTTGATGTTGGCTGTTTATGCATCCAATCAAGTACCTGAAGTTGTTATTGGTGATCCTAAACGGTTCTGGCAAATAATTACTAATCAAGTACCACATCTATGGATACAAAGTGGCAGAAGTACAACCTTTTTCCTTCACAGTGCCAAGGGCTGA 1785 0.4118 MSLSRRLSSSNGKLQQSMKFFKGNEPLHRSNSDSTCRRKPLLLLIFGLVAIGSAWFLLSFNTKCLMSKENEAACGGRARILLHRYNIIKKQLHAQNTMQSWKLRLCEIKDFISLSNLVKGFWWGLIGIVMSYKLSGFCLSWRSQKHKIVKDHPVAQKKKLQHFVWGPSKSAGRWRKKFLVIFVSLGIIASIWLFWHLNMNIMQRREHLLANMCDERARMLQDQFNVSMNHVHALAILVSTFHHDKHPSAINQKIFGEYTESTAFERPLTSGVAYAMKVLHSDRMHFERQHGWTIKKMETENEALVQDCIPENLDPAPFQDEYAPVIFAQETVSHIVSIGMMSGKEDGENILRARASGKGVLTSPFKLLKSNQEGGCVITLTFLQMLHRSSVLKLLWGASYDVPSLVDKLLHQLASKQTIAVNVYDTTNASASITMYGTDVVDTGLLHISRLDFGDPLRKHQMHCRFKQRPPLPWTAINASVRVLVITLLLGHIFYAAIDRIAKVEDDYREMRELKVRAEAADVAKSQLFKIDSPVLTLKGLVSHLMLAVYASNQVPEVVIGDPKRFWQIITNQVPHLWIQSGRSTTFFLHSAKG 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0031 594 SMART CHASE_2 246 438 IPR006189 -
Lal22g0031 594 Pfam CHASE domain 249 436 IPR006189 -
Lal22g0031 594 Gene3D - 197 249 - -
Lal22g0031 594 Gene3D CHASE domain 250 470 IPR042240 -
Lal22g0031 594 PANTHER TWO-COMPONENT HISTIDINE KINASE 163 528 - -
Lal22g0031 594 PANTHER TWO-COMPONENT HISTIDINE KINASE 544 574 - -
Lal22g0031 594 ProSiteProfiles CHASE domain profile. 246 463 IPR006189 -
Lal22g0031 594 PANTHER HISTIDINE KINASE 2 544 574 - -
Lal22g0031 594 PANTHER HISTIDINE KINASE 2 163 528 - -
Lal22g0031 594 Coils Coil 501 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0031 Lal-Chr22 225010 233501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0031 114 583 Miscellaneous Gene Families AT5G35750 55.533 1.10e-174 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0031 K14489 - gmx:100805107 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1645 18 17781813 17791244 Lal22g0031 22 225010 233501 LSH