Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0014 ATGATGAATCCAGCAAGCATCTCCGACCCATTGAAGTGGGGTGTGGCAGCGGATTCAATGAAGGGAAGTCACTTTGATGAAGTGAAAGAGATGATAGAAGAGTACAGGAAGGCAGTGATATGTCTTGATGGTGGGAAAACATCACTAAGAATACCCCATGTTGCTGCTGTTGCTAAAACTAACTCACATGTCAAGGTTAACCTCTCTGATTCTGCAAGGCCAGGTGTTGATGCCAGTTGTAAGTGGATCATGGAAAGCATTAAACTTGGCACTCAGATTTATGGTGTTACAACTGGATTTGGTACTGCCTCCAATAGGAAGACAAAACAAGGTCTTCTCCTTCAGAAGGAGATGGTCAGGTTTTTGAACTGTGGAATATTTGGCAACGGAACTGATATATTATCTCATGCACTGCCTCAGTCAGCAACCAGAGCAGCAATGCTGGTGAGGGTTAATACCCTTCTTCAAGGGTACTCAGGCATTAGATTTGAAATCTTAGAAGCAATCACCAAACTCCTCAACCACAATGTAACCCCCATCTTGCCGTTACGTGGTACAATCACTGCTTCTGGTGATCTAATCCCACTGTCCTACATTGCTGCATTGCTAATAGGTAGGCAAAACTCCAAAGCTGTTGGACCATCTGGTGAGACCCTGAATGCCGAGGAAGCATTCCATTTAGCAGGTATGCATTCAGGGTTTTTTGAGTTGCAGCCAAAGGAAGGTCTTGCCCTCGTAAATGGAACCGCTGTTGGGTCGGGCGTAGCTTCTATGGTCCTTTTTGAGGCAAACATATTAGCTTTATTGTCAGAAGTGCTATCTGCAGTTTTTGCAGAAGTTATGCAGGGGAACCCAGAATTTACGCACCACCTGATACACAAGCTTAAGTACCATCCTGGTCAAATTGAGGCTGCAGCTATTATGGAACACATTTTAGATGGAAGCTCTTACATCAGAAAAGCAAAATTGCAACAACCAGATCCATTACAGAAGCCTAGAAAAGATCGCTATGCTCTTCAAACTTCTCCTCAGTGGCTTGGTCCGCAGATTGAAGTCATAAGGTATTCGACAAAATCAATTGAAAGGGAGATAAACTCAGTGAATGACAATCCTTTGATTGATGTCACTGGGAATAAGGCCTTGAATGGGGGTAATTTCCAAGGCACCCCAATTGGAGTTTCAATGGATAACACACGGTTAGCTATTGCTTCAATTGGCAAAATCATCTTTGCCCAATTCACTGAGCTGGTCAATGACTTGTATAATAATGGGTTGCCATCAAACCTCTCTGCTGGTAGAAATCCAAGTTTGGATTATGGTTTTAAGGCATCTGAAGTTGCCATGGCTGCTTATTGTTCTGAACTTCAATATCTAGCAAATCCAGTAACAAGTCATGTGCAAAGTGCTGAGCAGCACAACCAAGACGTGAACTCTTTGGGTTTAATTTCTGCTTGGAAAACTGCTGAAGCGGTTGAGATTTTGAAGCTCATGTCCTCTACTTATTTGGTTGCACTCTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTAAAGAACACAGTCAAGAATACTGTAAGCAGAGTTGCCAAGAAGACATTAACCACAGAAGACAAAGAAGAAATCAACCCATTTCGGTTTTGTGAGAAAGAATTGCTCCAAGTGGTTGATAGAGAATATGTATTCTCCTACATTGATGATCCTTCCAATGTTGCTTACCCATTGATGCCAAAACTAAAGCAAGTACTATATGAGCAAGCACACATCAGTGCCATTAATGACAAGAATGTGAGCTTGTTAATTTTTGAGAAGATTGGAGATTTTGAGGATGAAATAAAGTCTCTCTTGCCGAAGGAAATTGAAAGTGCAAGAGTGGATTATGAAAACGGCAATCCGGCAATTCCAAACAGAATTAAGGATTGTAGGTCATATCCACTATATAAGTTTGTGAGGGAGGAATTAGGGTCAGGGTTGCTAACTGGAGAAAAGACTGTCTCACCAGATGAGGAATTTGAAAAAGTATTTTCAGCAATATGTCAAGCAAAGATTATTGACCCAATTCTGGAATGCCTCAGAGAATGGAATGGAGTTCCCATTCCATAA 2103 0.4175 MMNPASISDPLKWGVAADSMKGSHFDEVKEMIEEYRKAVICLDGGKTSLRIPHVAAVAKTNSHVKVNLSDSARPGVDASCKWIMESIKLGTQIYGVTTGFGTASNRKTKQGLLLQKEMVRFLNCGIFGNGTDILSHALPQSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNVTPILPLRGTITASGDLIPLSYIAALLIGRQNSKAVGPSGETLNAEEAFHLAGMHSGFFELQPKEGLALVNGTAVGSGVASMVLFEANILALLSEVLSAVFAEVMQGNPEFTHHLIHKLKYHPGQIEAAAIMEHILDGSSYIRKAKLQQPDPLQKPRKDRYALQTSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVTGNKALNGGNFQGTPIGVSMDNTRLAIASIGKIIFAQFTELVNDLYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISAWKTAEAVEILKLMSSTYLVALCQAIDLRHLEEILKNTVKNTVSRVAKKTLTTEDKEEINPFRFCEKELLQVVDREYVFSYIDDPSNVAYPLMPKLKQVLYEQAHISAINDKNVSLLIFEKIGDFEDEIKSLLPKEIESARVDYENGNPAIPNRIKDCRSYPLYKFVREELGSGLLTGEKTVSPDEEFEKVFSAICQAKIIDPILECLREWNGVPIP 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0014 700 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 9 691 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lal22g0014 700 PANTHER HISTIDINE AMMONIA-LYASE 3 700 IPR001106 -
Lal22g0014 700 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 185 201 IPR022313 GO:0016841
Lal22g0014 700 Gene3D Fumarase/aspartase (Central domain) 250 696 - -
Lal22g0014 700 Gene3D - 515 636 IPR023144 -
Lal22g0014 700 PANTHER PHENYLALANINE AMMONIA-LYASE 3 700 - -
Lal22g0014 700 Gene3D - 3 249 IPR024083 -
Lal22g0014 700 CDD PAL-HAL 47 512 IPR001106 -
Lal22g0014 700 Pfam Aromatic amino acid lyase 49 520 IPR001106 -
Lal22g0014 700 SUPERFAMILY L-aspartase-like 9 700 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0014 Lal-Chr22 122823 125593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0014 9 700 Monolignol Biosynthesis Gene Families AT2G37040 72.872 0.0 1061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0014 K10775 - gmx:100787872 1176