Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0013 ATGTCTACACAAGCTCTGGTATCCTCATCATCTCTTACCTTCTCATCAGAGGCTCTCAAGCAGAGTCTTGGTGCTAGATCACTCCAATCACCAATTGGGTTCTCCAAAAAAGCTTCCTTTTTGGTTAAGGCAGCTTCCACTCCCCCTGTCAAGCAAGGAGCAAATAGACCCTTGTGGTTTGCATCAAAGCAGAGTCTTTCTTACCTGGATGGCAGCTTACCTGGTGACTTTGGATTTGACCCTCTCGGACTGTCAGACCCTGAAGGAACAGGAGGGTTCATTGAGCCAAGATGGCTAGCATATGGTGAGGTTATCAACGGCCGTTATGCAATGTTAGGTGCAGTTGGTGCTATAGCACCTGAGATCCTTGGCAAGGCTGGTCTGATTCCTGAGGAAACAGCACTACCATGGTTCCAAACCGGTGTGATCCCACCGGCCGGAACATACGACTATTGGGCAGACCCTTACACACTCTTTGTGTTTGAGCTGGCACTCATGGGATTCGCGGAGCACAGGAGATTTCAAGATTGGTACAACCCTGGCTCTATGGGTAAACAGTACTTTTTGGGATTAGAGAAAGGTTTCGTAGGTTCTGGTAACCCTGCTTACCCTGGAGGACCTTTCTTTAACCCTCTTGGTTTTGGTAAGGATGAGAAGTCCTTGAAGGACTTGAAGCTGAAGGAAGTTAAGAATGGGAGGTTGGCTATGTTGGCAGTGTTGGGTTATTTTATTCAAGGTCTTGTGACAGGAGTTGGGCCATACCAAAACCTTCTTGATCATCTGGCTGACCCTGTCAACAATAATGTCTTGACCAGTCTCAAGTTCCACTAA 831 0.4741 MSTQALVSSSSLTFSSEALKQSLGARSLQSPIGFSKKASFLVKAASTPPVKQGANRPLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPEETALPWFQTGVIPPAGTYDYWADPYTLFVFELALMGFAEHRRFQDWYNPGSMGKQYFLGLEKGFVGSGNPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAVLGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0013 276 Pfam Chlorophyll A-B binding protein 67 245 IPR022796 -
Lal22g0013 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Lal22g0013 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
Lal22g0013 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 275 IPR001344 GO:0009765|GO:0016020
Lal22g0013 276 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0013 Lal-Chr22 120360 122133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0013 20 276 Chloroplast and Mitochondria Gene Families AT1G61520 87.938 2.23e-168 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0013 K08909 - gmx:100784090 495.738