Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1374 ATGGGTGACATTAATCTTTTACATGGAAACTTCCCAAATAATGAGGATTTGAACATCGAGTCATGCATTGGAATGGAATTTGATTCTATCGAAAATGTGAGGGAGTTTTACAATTTCTTTGCAAAGAATAAAGGTTTTGGAGTACGGGTTCGATCAACTAAACCGAAGAGGGCAATTTTGGTCTGTTGCAGTGAAGGTCAACACAAAGTTAAAAGTGGTGCAAATGAAGAAGCTGAAGATAATGTTAGTCAAACAAAAAGAAATTGTTCAACTCTTCGAACTGGTTGTCAGGCTTCACTTGTTGTTGCAAGAGGTATGGTAGAAAGTAATTGGGTTATAACATCATTTGTCAATGATCATAACCATATTATGGTTAGCCCAAGAAGTGTGTCCTATATGCGGTGTCATAAAAAGATGAGTGTTGCTGCAAAAAGTCTTGTTGAAAGATTTGAGGAAGAAGGCTTACCTACTGGAAAGGTAGCTGCAATTTTTAATAATGGTGAGTCGTCTTTCTCTCATAGAGATTGTTGGAATCACGTGAGAAATCTACGAAGAAAGAATTTAGATGCTGGGGATGCTCAAGCTGTTTTTGACTATTGTAAACTAAAGGAGACTGAAAATCCTAACTTTTTCTATGCAATCCAATTGGACGATGATTCTCGGATGGTCAATTTTTTTTGGGTGGACTCTAGATCAAGAGTGGCTTATCAACAATTTGGAGATGCAATAACATTTGATACTACCTATAAAACCAACAAGTATAATATGCCATTTGCCCCATTTTTTGGATTGAACAATCACTATCAGTCAATTTTGTTTGGTTGTGCTTTACAACAAGATGAGTCAGAGAGATCATTTATATGGTTGTTTCAAAAATGGCTTGAGGCAATGGATGGGAAAAAACTCGTGTCTATCATAACTGATCAAGATATCGCAATCAGAGGTGCTATCGCAAAAGTATTTCCAGAATCACGACATCGCCTTTGCTTGTGGCATATTATGCAAAAGTTTCCTACAAGGTTAGCTCACATATATCACAAACAATCTATGTTCAAGCGTGACTTGAAAAGATGCATACGAGATTCACCTAACATTGAAGTTTTTGAAAAAGAATGGGAGCGCATAAAAAATGATTATGAGTTGGAAGACAATGAATGGTTGAATGGGTTATACAAGATTAAAGAATCATGGGTACCTATTTATAATAGAAGCACATTCTTTGCTGGGATGAATACTACTCAAAGAAAAAGAAGAGAAGATTACGAATCTAGGCACAAACATCGTATTTTGAGTACTGGCTCCAAACTTGAGGAACATGCTGCTTCTATTTATACAAGAAATATTTTTGGTAAATTTCAAGATGAGCTTGGGAAGATCAACCAATTTACTAAGGTAAAGATTAGAAGAGATGGACCAAGGAATGTGTATCAAGTTTCTAGTTGTTATGATATCCAAGATACTGTCATTGTTGACATAAATTTAGACTCAAAGGTTGCTAAATGTGATTGTCAAATGTATGAATTTATGGGTATATTATGTAGACACATACTGGTAATTTTTCAAGCTAAAGGGGTTGTTCAAATTCCTGACCACTTTATTTTGAAACGTTGGACTAAGGAAGCTAACAAAGGTATTGAGGCTAGTTATATTGAAAATAATTTTGATGCTGAATTTACTACTTCAAAGATTGTACGAAGGATGCATGCTCAACAACAAGCAAGCATATTAGTTGATTTGGCTGAAGAGTCAGAGGAAATGTATAAGTTTATTATTTCAGAATTGAGCAACACACATAAGTCAGCAATTATAATGAAAACAAGTTCAATAATTGTTTTGGAGTCAAGCCACACAATTGTGAATGAAACTGTCATACCAGAGGAAGTAACAGAAGCACCACATTTAATTATTGGAGACCCACATATATCACGTACAAAAGGAAGAAGAAAAGATGGAGAAAAGATTACTCAAAATTGTAGATTTAAGAGTGGTCTTGAAGTATCACTTATCAAGTCATCAATCAAAAGGAAGAAATGCACGAAGTGTGGAGAACATGGCCACAACAAAAAAACTTGTAGGAAAATGTTCTGTGTATAA 2094 0.35 MGDINLLHGNFPNNEDLNIESCIGMEFDSIENVREFYNFFAKNKGFGVRVRSTKPKRAILVCCSEGQHKVKSGANEEAEDNVSQTKRNCSTLRTGCQASLVVARGMVESNWVITSFVNDHNHIMVSPRSVSYMRCHKKMSVAAKSLVERFEEEGLPTGKVAAIFNNGESSFSHRDCWNHVRNLRRKNLDAGDAQAVFDYCKLKETENPNFFYAIQLDDDSRMVNFFWVDSRSRVAYQQFGDAITFDTTYKTNKYNMPFAPFFGLNNHYQSILFGCALQQDESERSFIWLFQKWLEAMDGKKLVSIITDQDIAIRGAIAKVFPESRHRLCLWHIMQKFPTRLAHIYHKQSMFKRDLKRCIRDSPNIEVFEKEWERIKNDYELEDNEWLNGLYKIKESWVPIYNRSTFFAGMNTTQRKRREDYESRHKHRILSTGSKLEEHAASIYTRNIFGKFQDELGKINQFTKVKIRRDGPRNVYQVSSCYDIQDTVIVDINLDSKVAKCDCQMYEFMGILCRHILVIFQAKGVVQIPDHFILKRWTKEANKGIEASYIENNFDAEFTTSKIVRRMHAQQQASILVDLAEESEEMYKFIISELSNTHKSAIIMKTSSIIVLESSHTIVNETVIPEEVTEAPHLIIGDPHISRTKGRRKDGEKITQNCRFKSGLEVSLIKSSIKRKKCTKCGEHGHNKKTCRKMFCV 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1374 697 ProSiteProfiles Zinc finger CCHC-type profile. 677 693 IPR001878 GO:0003676|GO:0008270
Lal21g1374 697 Pfam SWIM zinc finger 498 523 IPR007527 GO:0008270
Lal21g1374 697 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 12 415 - -
Lal21g1374 697 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 419 654 - -
Lal21g1374 697 SMART 26again6 499 526 IPR006564 GO:0008270
Lal21g1374 697 Pfam MULE transposase domain 243 336 IPR018289 -
Lal21g1374 697 Pfam FAR1 DNA-binding domain 35 124 IPR004330 -
Lal21g1374 697 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 419 654 IPR031052 GO:0006355
Lal21g1374 697 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 415 IPR031052 GO:0006355
Lal21g1374 697 ProSiteProfiles Zinc finger SWIM-type profile. 486 524 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1374 Lal-Chr21 17114461 17116659 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal21g1374 MULE 1.9e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1374 - - qlo:115970754 755.747