Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1373 ATGCATTCCTATAATCTTCTTCTTCTTCTTCATCATCATCATCCTGGGTTGTTCTATTTCCGTAGTAAATCAAAGCCCATACCTATTTCCGTGAATCTCTCAACCAGAAATGGCGGTTCAGGTTCATGGTGTGAAAATGAGATGATGAGCTTGTATTCAGTATTGGGAGTGGAGGAAACGGTGTCGTTTAAAGAGATGAAACAAGCGTATAAGAAGATGGCAATGAAATATCACCCTGACGTGTCACCAGTGGATATGGTTGAAGAGAATACAAAGAGATTCATAAAGTTGAAAGAAGCTTATGAAACTCTTTCTGATCCAAAAACAAGAGCTATCTATGATACACATTTCGCTCTTGCCCTTAACTTTCCCTCCTCCTCTCATTACCATAATCACCAGGTGAGTGAACAAAAAAAGGAATGGAAAAAAAGGTGGCAAAGTCAGTTATCAGAGCTGAAGAGAAGAAGTGAGTGCACAGATAATAATAATATTAGATAA 498 0.3815 MHSYNLLLLLHHHHPGLFYFRSKSKPIPISVNLSTRNGGSGSWCENEMMSLYSVLGVEETVSFKEMKQAYKKMAMKYHPDVSPVDMVEENTKRFIKLKEAYETLSDPKTRAIYDTHFALALNFPSSSHYHNHQVSEQKKEWKKRWQSQLSELKRRSECTDNNNIR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1373 165 CDD DnaJ 52 106 IPR001623 -
Lal21g1373 165 ProSiteProfiles dnaJ domain profile. 50 117 IPR001623 -
Lal21g1373 165 SUPERFAMILY Chaperone J-domain 47 122 IPR036869 -
Lal21g1373 165 PRINTS DnaJ domain signature 52 70 IPR001623 -
Lal21g1373 165 PRINTS DnaJ domain signature 70 85 IPR001623 -
Lal21g1373 165 PRINTS DnaJ domain signature 89 109 IPR001623 -
Lal21g1373 165 Gene3D DnaJ domain 48 160 IPR036869 -
Lal21g1373 165 Coils Coil 142 162 - -
Lal21g1373 165 Pfam DnaJ domain 51 114 IPR001623 -
Lal21g1373 165 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Lal21g1373 165 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 43 162 - -
Lal21g1373 165 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 43 162 - -
Lal21g1373 165 SMART dnaj_3 49 109 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1373 Lal-Chr21 17106576 17107161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1373 52 121 C2H2 Transcription Factor Family AT1G74250 41.096 6.66e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1373 - - lang:109344106 219.935