Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1361 ATGAACTTGAATCATGAAATACCAGAGGCTGTAGATGAAATTGATGTTAGTGAAGATGAAAATTTTAATGAAGTAGAAGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAATGTATGGTATGAAGAAAGGATTTGGCATTAGAAAATATCATACCCGTCGGGACAAGGATGGTGAAATTTTATGGCAATCATTTTTTTGTGATAGAGAGGGATTTAGAGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAGGCAAAATTTTTGGTTCATTCGCCGGTCAATCTGGTGGATATCGGTATATTGGATTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAGGAATAATAGGAAATGGTGACGCAGAATCAGCATTACAATACCTGAAGGAACAATCAAAATCAGATTCTACAATGTACTGGAGACATAGTGTAGATGAAGAAAGTAAGTTGCAACAATTATTTTGGGCGGATGAATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACTGTATTTGCTGCTGGTATTGTGTCCAACGAGACAGAGGAAACGTATGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGAATTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATGCTTGGGCATCTCAGATATTTTATTGCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTCTTTGCTGGTTTGCATACGACATCACGTTGTGAGGGATTACATTCACAAATGGGGAGATATGTAGAATCTGGGTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGAGGAACAATGAGGTCATGGAAGATTTTAAATCTTCGTATGGTGATGAATTGTTACAAACTCCTTATCATAGTTTAGAGGGTCATGCCGCTTCCATATATACTAGAGTTGTTTTCAAAGAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACCTCAAGTCATGTCATATACAAGATTGGGAAGCATTATAATCCGAACAAGAAATGGCATGTATCACATTATGATAATGGTAGTAATGTGGACATCAAATGCTCGTGTAAACGAATGGAATCTTTTGGGATGCCATGCAGTCATAGTGTTTTTTTGTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTGGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAGGTGTTAATTTTCAACAATGCGAGTTAAGCAGAGAATCGGTTAAAAGCAGTAGATACGGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAAAGGAGGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAATGTGGTAGACTCCGATCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCAATGTAGATCAAGTAAGAGACCCAGTTCGAGTGCGTGCTAAAGGGAGAGTACCGGGGATTACCTCAAGGTCCAAGCGAGGTAATCAATGTGGTATATGTCGAGAAATTGGGCACAATAGGGCAAGTTGTCCAAATATTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCAATGAAGAATGA 2067 0.3677 MNLNHEIPEAVDEIDVSEDENFNEVEEFDFEEIDFGSLNEDEMYGMKKGFGIRKYHTRRDKDGEILWQSFFCDREGFRDKKNELVRKRAPRKETRCGCLARMKIHIDKEKASNRSMTETDIALMNTMREVGIGTGKIFGSFAGQSGGYRYIGFSKKDMYNQIQRQGIIGNGDAESALQYLKEQSKSDSTMYWRHSVDEESKLQQLFWADECSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVSNETEETYVWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRIFPATHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYADVEIDEFNMMWEELIAKHALHNNAWASQIFYCRSMWARSYIRGKFFAGLHTTSRCEGLHSQMGRYVESGYNVTEFLHHFQRCLSYMRNNEVMEDFKSSYGDELLQTPYHSLEGHAASIYTRVVFKEFREILLEAAKLRIISSQQTSSHVIYKIGKHYNPNKKWHVSHYDNGSNVDIKCSCKRMESFGMPCSHSVFLLLILDISQLPSCLVLERWTKKAKNVEGVNFQQCELSRESVKSSRYGALSDACRVLCNLACEKEEDFSEMLEKVYNECGRLRSKQHSSSMENVDNANVDQVRDPVRVRAKGRVPGITSRSKRGNQCGICREIGHNRASCPNIVGSCSRTFDNDFNEE 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1361 688 Coils Coil 686 688 - -
Lal21g1361 688 ProSiteProfiles Zinc finger SWIM-type profile. 499 537 IPR007527 GO:0008270
Lal21g1361 688 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 129 640 IPR031052 GO:0006355
Lal21g1361 688 Pfam MULE transposase domain 222 316 IPR018289 -
Lal21g1361 688 Pfam FAR1 DNA-binding domain 43 109 IPR004330 -
Lal21g1361 688 PANTHER OS02G0262500 PROTEIN 129 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1361 Lal-Chr21 17008938 17011181 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal21g1361 MULE 1.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1361 - - lang:109350553 640.188