Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1330 ATGCAAATTATTACTTTCTCAATGGATTTATTTCCTCTTTTTCTTGTTATACTTCCTTTGTTAACATCTTCAGCAATTTCTCAGCTTCAAGAATTTATGAGCATTGATTGCGGGGGTTCAACAAGTAACTACACTGATAGAACAACAAGTTTGTCATGGATTTCAGACTCCATGATAATGAAACATGGCATTTCAGTGGAAGTAGAAAGTCCTAATGGAAACAAGGTTCAATATCAAAGGAGAAGAGACTTTCCTACAGATAGTAGGAAATATTGTTATAAACTAAGAACTGAAGAGAGGAGAAGGTATTTAGTGAGAGCAACTTTTCAGTATGGAAGTTTACAAAATGGAGACACATACCCTCAATTTCAGATCTACTTGGATGCAACAAAATGGGCCACTGTGTCAATATATGATGCGTCAAGAGTATATGTTGAAGAAATTATCTTTAGGGCACCTTCGGATTCTATCGATGTTTGCATGTGTTGTGCTACAACTGGTTCTCCTTTCATATCTACCTTGGAGTTAAGGCCTTTGAATCTTTCTATGTATGCCACAGATTTTGAGGACAATTTCTTCTTGAAAGTAGCTGCAAGGATTAATTTTGGTGCTCCAAGTGAGGATCCTGTCAGGTATCCAGATGATCCATATGACAGAATTTGGGATTCAGATCTTATTAGAAGACAAAATTATCTTGTTGGTGTGGCACCAGGCACAGAAAGAATCAACACAACTATGAACATAGAAATAGAGAGAAGAGAACATCCACCTATGAAAGTGATGCAAACTGCAGTTATTGGCACAAAAGGAGTACTCAGTTACAGATTAAACCTTGAAGACTTCCCTGCCAATGCTAGAGCTTATGCTTATTTAGCCGAGATTGAAGATTTGCCTAAGAATGAGACGAGAAAGTTTAAGTTGGAGCAACCTTATATAGCTGACTATAGCAATGCAGTGGTTAACATAGCTGAGAATGCTAATGGAAGTTACACTCTTTATGAACCAAGTTACATGAATGTGAGTTTGGACTTTGTTCTGTCTTTCTCCTTTGTTAAGACCATGGATTCTACTAGAGGACCTCTTGTAAATGCAATGGAAATAAGCAAGTATTTGCCAATAGCTTTGAAGACCGAAAGACAAGATTCAAATGCTGTGAATACATTTAGCTCCGTGTCTGCCGAAGGTGATCCTTGTGTACCAACACCTTGGGAGTGGTTAAATTGTAGTACTACTACACCTCCAAGAATTACAAAGATAAACTTGTCAAGAAGGAATGTGAAAGGTGAAATCCCACATGAGCTCAACAACATGGAATCATTGACAGAGTTGTGGTTAGATGGAAACTTGCTTACAGGTTCACTTCCTGACATGAGCAATCTTATCAATCTAAAGATTTTGCACATAGAGAACAACAAATTGACTGGCTCACTTCCATCTTACTTGGGTACTTTGCCAAATTTACAAGCACTGTTCATACAGAATAACTCATTTAGTGGTGAAATACCATCAGGATTAGTATCTCAAAAAATCATTTTCAACTATGATAACAATCCTGGACTACATACAGGAACAAAGAAGCATTCTAAGTTGATACTAGGAATTTCAATTGGAGTACTAGTAATTATACTTGTATTGTTCCTAGCAAGTTTAGTGCTATTGCATAAACTGAGGAGAAAGACATCTCAACAGAAACATGATGCAAAAGGTATTTCCGGGCGAAGTAGCACTAAACCTTTAACAGGATATAGAGGAGGGAGTTTAAGGGATGAAGGTACTGCTTACTATATTTCACTGTCTGAGTTGAAAGAAGCTACTAGTAATTTCGAAAAGAAAATCGGCAAAGGAAGCTTTGGATCTGTGTACTATGGGAAAATGAGTGATGGAAAAGAAGTAGCAGTTAAGACTATGACTGATCCATCAAGCCATGGGAACCAGCAATTTGTGAATGAGGTAGCTCTGCTTTCAAGAATTCATCACAGAAACTTGGTTCCTTTAATTGGATATTGCGAAGAAGAATATCAGCATATTCTGGTTTATGAGTATATGCACAATGGCACATTAAGGGATCACATTCATGTTCATGAATCTTCAAATCAGAAGAAATTAGACTGGTTAACTCGTCTTCGTATCGCGGAAGATGCAGCTAAAGGTCTCGAATACTTGCACACTGGATGCAATCCTAGTATCATACACAGGGATGTAAAGACAAGTAATATTCTCCTAGACATCAATATGAGAGCAAAAGTTTCAGATTTTGGACTCTCAAGACTTGCTGAAGAAGATTTAACTCACATATCAAGTGTTGCAAGAGGAACTGTAGGATACTTGGACCCTGAGTACTATGCAAATCAGCAATTGACTGAAAAGAGTGATTTATACAGTTTTGGAGTTGTTCTTCTTGAACTGATATCTGGAAGAAAGCCTGTTTCATCAGATGATTATGGTCCTGAAATGAATATAGTTCATTGGGCAAGATCCTTAATTAGAAAAGGAGATGTGATAAGCATAATGGATGAGTCCCTAGTAGGGAATGTGAAAAGTGAGTCCATTTGGAGAGTAGCTGAAATTGCCATGCAATGTGTACAACAACATGGTGCTTCTAGGCCAAGAATGCAAGAAGTGATTTTGGCTATACAAGATGCTTCTAAGATTGAAAAAGAGTCAGAATCTCAGCTTAAATTATCATCTTCAGGAGCTACCTCAAAACCACAATCTTCAAGGAAAACTTTGCTTACAAGCTTTCTTGAAATTGAGAGCCCTGACTTATCAAATGGTTGCATTCCATCAGCAAGATAA 2796 0.3741 MQIITFSMDLFPLFLVILPLLTSSAISQLQEFMSIDCGGSTSNYTDRTTSLSWISDSMIMKHGISVEVESPNGNKVQYQRRRDFPTDSRKYCYKLRTEERRRYLVRATFQYGSLQNGDTYPQFQIYLDATKWATVSIYDASRVYVEEIIFRAPSDSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLKVAARINFGAPSEDPVRYPDDPYDRIWDSDLIRRQNYLVGVAPGTERINTTMNIEIERREHPPMKVMQTAVIGTKGVLSYRLNLEDFPANARAYAYLAEIEDLPKNETRKFKLEQPYIADYSNAVVNIAENANGSYTLYEPSYMNVSLDFVLSFSFVKTMDSTRGPLVNAMEISKYLPIALKTERQDSNAVNTFSSVSAEGDPCVPTPWEWLNCSTTTPPRITKINLSRRNVKGEIPHELNNMESLTELWLDGNLLTGSLPDMSNLINLKILHIENNKLTGSLPSYLGTLPNLQALFIQNNSFSGEIPSGLVSQKIIFNYDNNPGLHTGTKKHSKLILGISIGVLVIILVLFLASLVLLHKLRRKTSQQKHDAKGISGRSSTKPLTGYRGGSLRDEGTAYYISLSELKEATSNFEKKIGKGSFGSVYYGKMSDGKEVAVKTMTDPSSHGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHVHESSNQKKLDWLTRLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDLYSFGVVLLELISGRKPVSSDDYGPEMNIVHWARSLIRKGDVISIMDESLVGNVKSESIWRVAEIAMQCVQQHGASRPRMQEVILAIQDASKIEKESESQLKLSSSGATSKPQSSRKTLLTSFLEIESPDLSNGCIPSAR 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1330 931 SMART serkin_6 606 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g1330 931 PANTHER OS07G0107800 PROTEIN-RELATED 19 909 - -
Lal21g1330 931 Pfam Malectin-like domain 35 369 IPR024788 -
Lal21g1330 931 Gene3D Ribonuclease Inhibitor 373 521 IPR032675 -
Lal21g1330 931 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524
Lal21g1330 931 ProSiteProfiles Leucine-rich repeat profile. 439 461 IPR001611 GO:0005515
Lal21g1330 931 SUPERFAMILY L domain-like 398 507 - -
Lal21g1330 931 CDD STKc_IRAK 612 875 - -
Lal21g1330 931 SUPERFAMILY Protein kinase-like (PK-like) 592 875 IPR011009 -
Lal21g1330 931 MobiDBLite consensus disorder prediction 567 581 - -
Lal21g1330 931 ProSiteProfiles Protein kinase domain profile. 606 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g1330 931 Gene3D Transferase(Phosphotransferase) domain 1 682 902 - -
Lal21g1330 931 MobiDBLite consensus disorder prediction 563 582 - -
Lal21g1330 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Lal21g1330 931 Pfam Protein tyrosine and serine/threonine kinase 608 875 IPR001245 GO:0004672|GO:0006468
Lal21g1330 931 PANTHER TYROSINE KINASE DOMAIN PROTEIN 19 909 - -
Lal21g1330 931 Gene3D Phosphorylase Kinase; domain 1 587 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1330 Lal-Chr21 16659786 16668611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1330 20 931 Receptor kinase-like Gene Family AT1G67720 68.723 0.0 1271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lal21g1330 Malectin_like 9.4e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1330 - - gmx:100798488 1541.94