Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1323 ATGTCAACATCAGCATTTCCACCACCTCCACCTTATTACAGACTCTACAAAAATTACTTGCAAGACCCTAATTCTGCTCCTGAGCCTCCACCACCTATAGAAGGAACCTATGTTTGTTTTGGAGCCACTTACACTACTAGTGACACTCTACCAAGCTTAGAAGAGCAAGGGGTGCGCCAGCTCTATCCTAAGGGAGCGAATGTTGATTTCAAGAAGGAGTTGAGGTCACTTAATAGAGACTTGCAGCTACACATTTTAGAGCTTGCTGACATCCTTATTGAGAGACCGTCACAGTATGCTAGGAGAATTGAGGAAATTTCAACTGTATTCAAAAACTTACATCACCTTTTAAACGCACTGCGTCCTCATCAGGCGAGATCAACTTTAGTTCGCATATTGGAACTTCAGATACTGAATCGCAAACGAGCAGTGGAGGATATAAAAAGGAGGAGAGAAGAAGCACAGGGTATCCTTAAGGAGTCCCTTGCAATACTTGATGGCCATTAG 507 0.432 MSTSAFPPPPPYYRLYKNYLQDPNSAPEPPPPIEGTYVCFGATYTTSDTLPSLEEQGVRQLYPKGANVDFKKELRSLNRDLQLHILELADILIERPSQYARRIEEISTVFKNLHHLLNALRPHQARSTLVRILELQILNRKRAVEDIKRRREEAQGILKESLAILDGH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1323 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 167 IPR009244 GO:0003712|GO:0006357|GO:0016592
Lal21g1323 168 SUPERFAMILY Mediator hinge subcomplex-like 67 159 IPR037212 GO:0016592
Lal21g1323 168 Gene3D - 61 159 IPR044888 -
Lal21g1323 168 Pfam MED7 protein 3 157 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1323 Lal-Chr21 16610082 16614050 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Lal21g1323 Med7 3.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1323 K15148 - jre:109003137 281.952