Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1314 ATGTTAATGGAAAAAGAGGTGAAGGACAAGTCCATTGATCATGGCATTGCTGCTCCTAATAGAACCTATTCTCATTCATTTTCTTGGACTCATAATTTTCCAAATAGCCACAACAACCACAAGCCACAAAAAAATACTAGTAAATCAAGATCTTCATTATTGCCACCCCTTCAACCTCTCTCAATCAATAAGCCTAGTGTTGAGGAATGGCCTAGTGCAGGATGTGATGATCTTGGAGTTTGGCCTATTCCACAAACTCCAAAAGGGTCCATAATACCCTTTGATTCAGATCAACCCAACAAAGATTTTCAGTTAAAGAAGGACAAATTGGCCTTCTTTGATAAAGAGTGTTCAAGAATTGCTGAGTATATATACTTAGGGAGTGAAACAGTGGCTAAGAACCATGAACTTATGAGTCAGAAAGGTATCACTCATGTGCTAAATTGTGTTGGTTTTGTTTGTCCTGAGTATTTCAAAAGTGACTTTGTGTATAAGACACTTTGGTTGCAAGATAGCCCCACAGAAGATATTACAAGTGTTTTGTATGATGTGTTTGATTACTTTGAGGATGTTAAAGAAAAAGGTGGGAGAGTCCTTGTTCATTGTTGTCAAGGGGTTTCAAGATCAAGCTCTCTTGTTATTGCTTATCTCATTTGGAGTAATAGACAAAGCTTTGAAGATGCTTTTCAGTTTGTGAAGAGTGCAAGAGGAGTAACAAATCCAAACATGGGTTTTGCTTATCAACTTTTGCAGTGTCAGAAAAGGGTTCATGCTATGCCTTCAAGTCCAAATTCAAAGCTTATGATGTATAGGATTGCACCTCATTCACCCTATGATCCTCTTCATTTGGTTCCCAAAATGGTGAACCAAATAAATGCACAAGCACTTGATTCTAGAGGGGCATTCATTGTTCATGTTCCTTCTGCTATTTATGTATGGATTGGAAAACATTGTAACTCGGTTTTGTCACGCAATGCAAAGGCTGCAGCATTTCAGGTAATCCGATATGAGAGGGCGAAGGGTCCAATTCTGAGCATCCATGAAGGGAAAGAACCACATGAGTTCTGGATTGCTCTTCCCGACACGGAAGAGGTCAAGAAGGAAGAGCATTCTGAGAGGGAAAACATAGAGATTGGTCCAAGAACAGTTGATGCATACGATTTGGATTTCAAGATTTTCCACAAGGCAATTGCTGGTAGAGTTGTTCCATCTTTTTCTGTACTTAATGTTGACTCAGAAACTTGCCTTCATGCTAGAGAACATGGTTGGGGAAGACTGAGGAGGAAGTTTACTAGTGGTGGCATGAAAGGATTGTTCACATCCTCCAAAAGGAACTATGATGCATCATTCAATGATCATTGTGGTATGATTATGGAACAAGAAACTGTACCTGAACCTTGTGCTGCTTCATCATTGCCACCATCAACACCTTCTTCAACCTTAAGTTCTGATTACACCACTTCATCTATATTTTCACCTTCCTCTACCAATTAG 1494 0.3936 MLMEKEVKDKSIDHGIAAPNRTYSHSFSWTHNFPNSHNNHKPQKNTSKSRSSLLPPLQPLSINKPSVEEWPSAGCDDLGVWPIPQTPKGSIIPFDSDQPNKDFQLKKDKLAFFDKECSRIAEYIYLGSETVAKNHELMSQKGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDITSVLYDVFDYFEDVKEKGGRVLVHCCQGVSRSSSLVIAYLIWSNRQSFEDAFQFVKSARGVTNPNMGFAYQLLQCQKRVHAMPSSPNSKLMMYRIAPHSPYDPLHLVPKMVNQINAQALDSRGAFIVHVPSAIYVWIGKHCNSVLSRNAKAAAFQVIRYERAKGPILSIHEGKEPHEFWIALPDTEEVKKEEHSERENIEIGPRTVDAYDLDFKIFHKAIAGRVVPSFSVLNVDSETCLHAREHGWGRLRRKFTSGGMKGLFTSSKRNYDASFNDHCGMIMEQETVPEPCAASSLPPSTPSSTLSSDYTTSSIFSPSSTN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1314 497 MobiDBLite consensus disorder prediction 466 497 - -
Lal21g1314 497 CDD DSP 117 251 - -
Lal21g1314 497 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 175 236 IPR000387 GO:0016311|GO:0016791
Lal21g1314 497 MobiDBLite consensus disorder prediction 472 497 - -
Lal21g1314 497 ProSitePatterns Tyrosine specific protein phosphatases active site. 200 210 IPR016130 GO:0016311|GO:0016791
Lal21g1314 497 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 21 490 - -
Lal21g1314 497 Gene3D Severin 266 367 IPR029006 -
Lal21g1314 497 PANTHER MKPA PROTEIN 21 490 - -
Lal21g1314 497 Pfam Gelsolin repeat 289 356 IPR007123 -
Lal21g1314 497 ProSiteProfiles Dual specificity protein phosphatase domain profile. 116 258 IPR020422 GO:0006470|GO:0008138
Lal21g1314 497 Gene3D Protein tyrosine phosphatase superfamily 100 257 IPR029021 -
Lal21g1314 497 SUPERFAMILY Actin depolymerizing proteins 262 371 - -
Lal21g1314 497 Pfam Dual specificity phosphatase, catalytic domain 124 254 IPR000340 GO:0008138|GO:0016311
Lal21g1314 497 SMART dsp_5 116 255 IPR020422 GO:0006470|GO:0008138
Lal21g1314 497 MobiDBLite consensus disorder prediction 28 58 - -
Lal21g1314 497 SMART VILL_6 271 362 IPR007122 GO:0051015
Lal21g1314 497 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 109 259 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1314 Lal-Chr21 16453689 16455182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1314 34 152 Protein tyrosine phosphatase (PTP) family AT3G55270 46.512 6.31e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1314 - - gmx:100775448 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1294 14 14598238 14600373 Lal21g1314 21 16453689 16455182 PCT