Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1286 ATGGCACAATCAAGTACACATGTTTTCTTATTATCATTGATTTCAATTGCCTCTTTTGTGGCGGTAAGTGAAGGATATTTGGGCAAATACACGCATATTTACATCAAGAATGGTTTGGACAAAGGTACTCCTTTGACAGTTCACTGCAAATCGAAAGACGATGACCTTGGTGTTCATGTTCTAAAATATGATGAAGAATATAAGTTTCAATTTGAGCCTAGCTTTAATCAGAATATATTATTTTTCTGTGGCTTCACTTGGGATTCAAATTTACACCGGTTTGACATCTATGATCAGAATAAAGATTCCTGGAAGTCTCGCTTGAGCGAGAGATTCTCGCCTGAGCGAGAAAGGATCACCTGGGAGGGTGAAATCCTGGACTATACTGGAGGATTCTCGCCCGAGCGAGAGTTGTCTCGCCTGGGCGAGAAATGA 435 0.4069 MAQSSTHVFLLSLISIASFVAVSEGYLGKYTHIYIKNGLDKGTPLTVHCKSKDDDLGVHVLKYDEEYKFQFEPSFNQNILFFCGFTWDSNLHRFDIYDQNKDSWKSRLSERFSPERERITWEGEILDYTGGFSPERELSRLGEK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1286 144 Pfam Plant self-incompatibility protein S1 32 106 IPR010264 -
Lal21g1286 144 PANTHER S-PROTEIN HOMOLOG 18-RELATED 20 104 - -
Lal21g1286 144 PANTHER - 20 104 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1286 Lal-Chr21 16190454 16190952 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1286 23 102 Carbohydrate Esterase AT3G16970 45.000 1.19e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1286 - - vvi:104877683 92.8189