Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1258 ATGAAGGGCTATGAGTCCCGTTCAAGTTCTTCTTGTGCAGCTTGCAAATTATTGAAAAGAAGGTGCACACCAAATTGTGTTTTTGCACCTTACTTTCACTCAGATGAGTGTATGAAATTTGCTAAAGTTCACAAAGTATTTGGAGCAAGTAATGTAAGTAAGATCCTCATTGAAGTTCCACAAGAACATAGAGAAGATACTGTGAATTCTCTTGCATTTGAGGCAGAAGCAAGGCTTAGAGACCCAGTTTATGGATGCATTGGTGACATACTACTTTTACAAATGAAGATGTTTGATCTTCAACATGATTTAGCCATTGCTAAGGATCGTTTAGCTCGTTGCGCAGCCGCTACTGTTGGACCAGGCTGCAACCGGGAAGCCTCCAACCACCGGGGAGTTTCATTGCTACCAGGGTATGGGAAGAGTGGAGAGCCACAAGTGAGACACCACGTCTTGAACCAAAACCTTAATGCATTAGTCCCAACAGCTACCGCCACCGTTACAACCACCACTTCTAGTGATGTTTTGCATGCTACACATGTTGTTAGTTTGCCTCCTTTACCTGACTTTTCTACTTTTAATGGTGTCAATGATAGTTTCTGCCATAACTCTTCTTCATCTCAGTTATTGAGGAGACATGAAATAGTGGATGATTTCATTCAAATCCCATATATACTTTAA 681 0.4126 MKGYESRSSSSCAACKLLKRRCTPNCVFAPYFHSDECMKFAKVHKVFGASNVSKILIEVPQEHREDTVNSLAFEAEARLRDPVYGCIGDILLLQMKMFDLQHDLAIAKDRLARCAAATVGPGCNREASNHRGVSLLPGYGKSGEPQVRHHVLNQNLNALVPTATATVTTTTSSDVLHATHVVSLPPLPDFSTFNGVNDSFCHNSSSSQLLRRHEIVDDFIQIPYIL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1258 226 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lal21g1258 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 121 - -
Lal21g1258 226 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Lal21g1258 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1258 Lal-Chr21 15763886 15764566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1258 1 111 AS2 family AT3G11090 73.874 6.78e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal21g1258 LOB 8.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1258 - - gmx:100791250 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1258 21 15763886 15764566 Lal21g1258 21 15763886 15764566 ECH