Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1256 ATGGGAAGTTCAGTGCGTATCAAAGAAGCTGTGGTGGTGACACCTTCTGAACCCACCCCAAATTGTGTTCTCCCTCTCTCAGCACTTGACTCTCAACTCTTCCTTCGTTTTACCATAGAGTACCTCCTTGTTTATAAGCCCGGTCCAGGCCTGGACCAGGCTTATATTTCCGCTCATTTAAAAGCAGCATTAGCCAAAGCCATGGTTCATTACTATCCCTTTGCGGGAAGAGTGAGACCCGGGTCATCAGGCTCGGGCCTCGAGGTAGTATGTAAAGCCCAAGGAGCTGTTTTTATTGAAGCCTTCTCTGACAGTTATGTTGTAACTGACTTCGAGAAAGCCTCGAAAACAGTTACACAATGGAGGCCACTCTTGTCCTTACATGTGCAGGATGTTCTCAAAGGATCACCAATACTAGTTGTCCAGCTCACGTGGCTCCGTGATGGCGGAGCCACGGTTGGAATTGGAATCAACCATTGCATTAGCGATGGCGTTGGCAGCGCAAATTTTTTAATCTACTTCGCCGAGTTAGCTTCAGGAAAAAGCAGCAATCCCAAACCGAAACCAGTCTGGGATCGCCACCTTCTCAATCCACCACTACCACAAAAAATAAAATCAATGAACCGGAACATTCCACCCGAGTTCAACCGGGTTCAAGATCTATGCGGGTTCATGAACCGGGTCACAAACGGTCTAAAACCGACCTCAAATGTTTTCAACAAGAGAAAACTCAACGAGTTAAAAAGAAATGCTCTTCACACGTGTGAACTGAACAACGCACATTTCACCGCATTCGAAGTTCTAGCATCACACGTGTGGAGAGCGTGGGCGATATCGATCGGTTTTCCACGGAACCAGGTTTTAAAACTTTTATTCAGCGTAAACATAAGAACCCGGTTCAAACCGGGTTTAGCAGAGGGTTATTACGGAAACGCGTTTGTTCTGGCGTGTGGTGAAAGCAACGCGGGCGAGTTAGTGGAGAGAGGAATCGGATACGGGTCGGGTATAGTTAAGCGTGCGAAGGAGAGAGTAGATAGTGAGCACGTGCGAAGGGTGAGTGAGTTGGTGAGCGAGTGGAGAGCGAGTCCTGACTCAGTTGGGGTGTTGATATTGACTCAGTGGTCAAGGTTGGGATTAGAGAAAGTTGAGTTAGGAATGGGAATGGGGAAACCAGTGTATGTAGGACCCATATGTTGTGATAGGTATTGTATATTTTTGCCGGTGAAGGATCAGAGGGACAGTGTTAGGGTGGCGGTGGCTCTTCCCGCCGCCGCCGTTGATGATTATAACCGTTTAATCAATGAATGA 1308 0.4763 MGSSVRIKEAVVVTPSEPTPNCVLPLSALDSQLFLRFTIEYLLVYKPGPGLDQAYISAHLKAALAKAMVHYYPFAGRVRPGSSGSGLEVVCKAQGAVFIEAFSDSYVVTDFEKASKTVTQWRPLLSLHVQDVLKGSPILVVQLTWLRDGGATVGIGINHCISDGVGSANFLIYFAELASGKSSNPKPKPVWDRHLLNPPLPQKIKSMNRNIPPEFNRVQDLCGFMNRVTNGLKPTSNVFNKRKLNELKRNALHTCELNNAHFTAFEVLASHVWRAWAISIGFPRNQVLKLLFSVNIRTRFKPGLAEGYYGNAFVLACGESNAGELVERGIGYGSGIVKRAKERVDSEHVRRVSELVSEWRASPDSVGVLILTQWSRLGLEKVELGMGMGKPVYVGPICCDRYCIFLPVKDQRDSVRVAVALPAAAVDDYNRLINE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1256 435 Pfam Transferase family 4 426 - -
Lal21g1256 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 432 - -
Lal21g1256 435 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 432 - -
Lal21g1256 435 Gene3D - 230 433 IPR023213 -
Lal21g1256 435 Gene3D - 2 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1256 Lal-Chr21 15754968 15756275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1256 5 435 Monolignol Biosynthesis Gene Families AT5G48930 25.771 3.50e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1256 - - gmx:100803812 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1256 21 15754968 15756275 Lal21g1256 21 15754968 15756275 ECH