Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1254 ATGGACCATTCCTCTTCTTCACTTCACCCTCCCCAAGAAAACAAACAACACACTAACCCTTCTTCTACCAAAACCATTGAAAAATCATCAAACAGTTCCAAAGGTAAGTGCAAAGTTAAAGGTAAAGGTGGACCTGATAACAACAAATTCAAGTATCGTGGTGTTAGACAAAGAAGCTGGGGAAAATGGGTTGCTGAGATCCGAGAACCAAGAAAAAGAACAAGAAAGTGGCTTGGAACTTTTTCTACTGCTGAAGATGCTGCTAGAGCTTATGACCGTGCAGCAATTATTCTTTATGGCTCTAGGGCTCAACTTAATCTTCAACCTTCAGGTTCTTCTATTTCTCAATCTTCTTCTCGTGCTTCTTCTTCTTCTTCTTCCACTCATACCCTTCGTCCTTTGCTACCTCGCCCTTCTGGTTTTGCCTTCACTTTCTCCAATTCCATCAATAATTCTCATCATTTTCCTCAAGCTTTTAACTCCGCCGCCACATCAGGGTTCATTCCTTGTGGGGTTTATTCCGGTGGTGGTGGTGGTGGCGGCGGTGAGAACAATAATAATAACAATAATATAGGTACCACTCCTGTGTTGTGCCCTATTAGTAATAACAATATAGTACAACAATATCATCAAGCTCAATTTAATTCTCATTGTTATTCTCAACAAGTTGTGCTAGTGGAACAAGAAGAAGAACTTGGTGAAGTAGTTATTGGTCATAATCATAACGGATCCGGAAAAGAAACCTCGTACAAGAACAACACAAGCCATCAACATCATAATCATGTTGTAAATAGTGATACTAATGTTGTGTCTAATCACCTTGACGAGCAGCATCAGAATTGCATGTACAATTTGGTGGGTTCTGTTGGGTCAAGTTTGTCATCTTCTTTGACTATATCTGTACCTGTGGAAAATTCTGAGTCTCAAATGGGTGTAGGAATTGGATCTCCAACTTCATTTATGTGGCCAATGTCAATGGAGGAAGATGATTACCCATCTAGTTTGTGGGATTATGATGATCCTTTCTTCTTGGATTTTTAA 1041 0.3967 MDHSSSSLHPPQENKQHTNPSSTKTIEKSSNSSKGKCKVKGKGGPDNNKFKYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQPSGSSISQSSSRASSSSSSTHTLRPLLPRPSGFAFTFSNSINNSHHFPQAFNSAATSGFIPCGVYSGGGGGGGGENNNNNNNIGTTPVLCPISNNNIVQQYHQAQFNSHCYSQQVVLVEQEEELGEVVIGHNHNGSGKETSYKNNTSHQHHNHVVNSDTNVVSNHLDEQHQNCMYNLVGSVGSSLSSSLTISVPVENSESQMGVGIGSPTSFMWPMSMEEDDYPSSLWDYDDPFFLDF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1254 346 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4 9 344 - -
Lal21g1254 346 MobiDBLite consensus disorder prediction 1 30 - -
Lal21g1254 346 CDD AP2 51 108 IPR001471 GO:0003700|GO:0006355
Lal21g1254 346 Pfam AP2 domain 51 99 IPR001471 GO:0003700|GO:0006355
Lal21g1254 346 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Lal21g1254 346 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Lal21g1254 346 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Lal21g1254 346 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Lal21g1254 346 MobiDBLite consensus disorder prediction 1 53 - -
Lal21g1254 346 SUPERFAMILY DNA-binding domain 51 108 IPR016177 GO:0003677
Lal21g1254 346 MobiDBLite consensus disorder prediction 108 133 - -
Lal21g1254 346 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 9 344 - -
Lal21g1254 346 MobiDBLite consensus disorder prediction 31 53 - -
Lal21g1254 346 Gene3D AP2/ERF domain 50 108 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1254 Lal-Chr21 15665413 15666453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1254 38 346 AP2-EREBP Transcription Factor Family AT2G40220 40.517 9.34e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal21g1254 AP2 9.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1254 K09286 - gmx:100779779 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1254 21 15665413 15666453 Lal21g1254 21 15665413 15666453 ECH