LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal21g1235	ATGGGGTTGTTGAAGTATGGGTGTGTATTTATAACTTTATTTGCACTTCTGATATGTGGGGTGGCAGAGGTTTACATAGTAACTGTTGAGGGTGAACCTATCATAAGTTACACTGGTGGTGTTGATGGGTTTGAAGCTACATTTGTGGATTCTGATGAGAAAATTGATACCACAAGTGAATTGGTCACTTCTTATGCTGAGCACCTTGAAAAAAGACATGATATGCTTCTCGGAATGCTGTTTGACCAAGGGACATACAATAAACTCTATAGCTACCGACATCTTATAAATGGGTTTGCTGTTCATCTTTCCCCAGAACAGGCAGAAACTCTTAGACATGCTCCCGGTGTGAAATCTGTTGTGAGGGACTGGAAAGTGAAGAAACTTACAACACATACCCCACAATTTTTGGGGCTTCCAACTGGAGTGTGGCCAACAGGAGGTGGATATGATCGGGCTGGAGAAGACGTTGTGATTGGTTTCGTGGACTCCGGGATCTATCCTCACCACCCAAGCTTTTCAACTCATAACACTGAAACTTATGGGCCAGTTTCAAAATATAGAGGAAAATGTGAAGTTGATCCAGACACTAGAAGAAGTTTCTGTAATGGGAAGATTATTGGAGCACAACATTTTGCTCAAGCTGCAATAGCTGCCGGGGCATTTAACCCTTCAATTGATTTTGCATCTCCTTTAGATGGAGATGGGCATGGAAGTCATACAGCCTCTATTGCAGCTGGACGAAATGGAATTCCTGTGAGGATGCATGGACATGAATTTGGGAAAGCAAGTGGAATGGCTCCACGTGCCAGGATTGCTGTGTATAAAGCACTCTATCCATTGTTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTACATGATGGGGTGGATATACTCAGCCTTTCAGTTGGACCAAATAGTCCTTCAACAGCCACCAAAACCACATATTTGAACCCTTTTGATATCACACTTCTTGGAGCTGTGAAAGCTGGTGTGTTTGTTGCTCAGGCTGCTGGAAATGGTGGTCCTTTTCCCAAGACACTAATTTCATTTAGTCCATGGATAACATCTGTAGCAGCTGCAATTGATGATCGTAGTTATAAAAATCATCTGTTCCTTGGAAATGGAAAAATCATAGCTGGAATTGGGTTGTCGCCTTCTACACATCTAAACCAAACATACACATTGGTTGCTGCGACTGATGTACTGCTAGATTCTTCAGTTACGAAGTACAGCCCCACAGATTGTCAGAGACCAGAAGTTTTAAATAGGAACTTGATAAAGGGGAATATTCTCCTATGTGGCTATTCTTACAACTTTATTTCTGGTACTGCATCAATAAAGAAAGTCTCAGAAACAGCAAGGGCCCTTGGTGCAGTTGGATTTGTTCTCTGTGTCGAAAATGTTAATCCCGGAGTCCATTTCTATCCAGTTCCTGTTGGCATTCCTGGGATTCTTATTACAGATGCCAGCAAGTCAAAGGAACTGATAGATTATTATAATATCTCCACTCCAAGAGACTGGACTGGAAGGGTAAAGAGTTTCAAAGGTACAGGTAAAATTGGTTATGGTTTGATGCCCATTCTCCATAAATCTGCACCACAGGTGGCATTATTCTCTGCAAGAGGGCCAAATATCAAGGACTACAACTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTAATTTGGGGAGCTTGGTCACTTAATGGAACTGATGAGGCAAATTATGACGGAGAGGGATTTGCTATGATATCTGGCACTAGCATGGCTGCGCCACATATAGCTGGAATTGCAGCTCTTATAAAGCAGCAACATCCACATTGGAGCCCTGCTGCCATTAAATCAGCCCTGATGACAACATCGACTACTTTAGACAGAGCCGGAAATCCTATTCTAGCACAGCAATATTCTGACACAGAAGCTATGAATTTGGTCAGAGCTACTCCTTTTGATTATGGAAGTGGCCATATTAATCCAAGAGCTGCCCTTGACCCTGGGCTCATCTTTGATACAGGGTATGAGGATTATCTTGGGTTCTTGTGCACAACACCTAGCATTGATGTTCATGAAATAAGGAAATACACAAACTTGCCATGTAACTATACCATAGGCCATCCAACAAATTTAAACACTCCATCTATTACATTTTCCCATCTTGTAAGAACTCAAATGGTCACTCGCACTGTCACTAATGTTGCGCAGCAAGAAACTTACGTGATCACGGCCAGAATGGACCCATCGGTTGCCATTGAAGTTAACCCTCCAGCAATGACCATCAAAGCAGGCGCGTCGCGTAAATTTACCGTGACACTTACTGTTCGGTCGGTAACCGGAACCTATAGTTTTGGAGAGGTTTTGTTGAAAGGGAGCAGAGGGCACAAGGTAAGGATTCCTGTTCTGGCCAATGGATATCCAAGATAA	2454	0.4279	MGLLKYGCVFITLFALLICGVAEVYIVTVEGEPIISYTGGVDGFEATFVDSDEKIDTTSELVTSYAEHLEKRHDMLLGMLFDQGTYNKLYSYRHLINGFAVHLSPEQAETLRHAPGVKSVVRDWKVKKLTTHTPQFLGLPTGVWPTGGGYDRAGEDVVIGFVDSGIYPHHPSFSTHNTETYGPVSKYRGKCEVDPDTRRSFCNGKIIGAQHFAQAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGRNGIPVRMHGHEFGKASGMAPRARIAVYKALYPLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPSTATKTTYLNPFDITLLGAVKAGVFVAQAAGNGGPFPKTLISFSPWITSVAAAIDDRSYKNHLFLGNGKIIAGIGLSPSTHLNQTYTLVAATDVLLDSSVTKYSPTDCQRPEVLNRNLIKGNILLCGYSYNFISGTASIKKVSETARALGAVGFVLCVENVNPGVHFYPVPVGIPGILITDASKSKELIDYYNISTPRDWTGRVKSFKGTGKIGYGLMPILHKSAPQVALFSARGPNIKDYNFQEADLLKPDILAPGSLIWGAWSLNGTDEANYDGEGFAMISGTSMAAPHIAGIAALIKQQHPHWSPAAIKSALMTTSTTLDRAGNPILAQQYSDTEAMNLVRATPFDYGSGHINPRAALDPGLIFDTGYEDYLGFLCTTPSIDVHEIRKYTNLPCNYTIGHPTNLNTPSITFSHLVRTQMVTRTVTNVAQQETYVITARMDPSVAIEVNPPAMTIKAGASRKFTVTLTVRSVTGTYSFGEVLLKGSRGHKVRIPVLANGYPR	817

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal21g1235	817	CDD	PA_subtilisin_like	378	514	-	-
	Lal21g1235	817	Gene3D	-	691	814	-	-
	Lal21g1235	817	Gene3D	-	369	534	-	-
	Lal21g1235	817	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	159	170	IPR023827	-
	Lal21g1235	817	CDD	Peptidases_S8_3	126	633	IPR034197	-
	Lal21g1235	817	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	14	816	IPR045051	-
	Lal21g1235	817	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	21	128	IPR037045	-
	Lal21g1235	817	Gene3D	Peptidase S8/S53 domain	156	687	IPR036852	GO:0004252\|GO:0006508
	Lal21g1235	817	PANTHER	CUCUMISIN-RELATED	14	816	-	-
	Lal21g1235	817	Pfam	Subtilase family	154	639	IPR000209	GO:0006508\|GO:0008236
	Lal21g1235	817	SUPERFAMILY	Protease propeptides/inhibitors	86	126	-	-
	Lal21g1235	817	PRINTS	Subtilisin serine protease family (S8) signature	154	173	IPR015500	-
	Lal21g1235	817	PRINTS	Subtilisin serine protease family (S8) signature	233	246	IPR015500	-
	Lal21g1235	817	PRINTS	Subtilisin serine protease family (S8) signature	596	612	IPR015500	-
	Lal21g1235	817	Pfam	Peptidase inhibitor I9	24	127	IPR010259	-
	Lal21g1235	817	ProSiteProfiles	Serine proteases, subtilase domain profile.	123	674	-	-
	Lal21g1235	817	ProSitePatterns	Serine proteases, subtilase family, serine active site.	597	607	IPR023828	-
	Lal21g1235	817	Pfam	Fibronectin type-III domain	719	811	IPR041469	-
	Lal21g1235	817	SUPERFAMILY	Subtilisin-like	129	678	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal21g1235	Lal-Chr21	15406542	15415240	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal21g1235	4	817	Subtilisin-like Serine Gene Family	AT4G30020	77.206	0.0	1313

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal21g1235	-		-	gmx:100784999	1449.11

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal21g1235	21	15406542	15415240	Lal21g1235	21	15406542	15415240	ECH
	Lal7g1103	7	17003820	17012213	Lal21g1235	21	15406542	15415240	PCT
	Lal19g1246	19	15680011	15686328	Lal21g1235	21	15406542	15415240	PCT
	Lal21g1235	21	15406542	15415240	Lal7g1103	7	17003820	17012213	PCT
	Lal21g1235	21	15406542	15415240	Lal19g1246	19	15680011	15686328	PCT