Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1221 ATGACTGGTGAGAGCAAAATTGTCCATAAGGATTCTAGGGACCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCAGCATGCTTGTAACCGGTGTTGGTATTAATACTGAATGGGGGCTTCTAATGGCTAGCATTTCAGAAGACAGTGGTGAAGAAACACCTTTGCAGGTCCGTCTAAATGGTGTAGCCACCTTCATTGGTATTGTTGGACTTTCTGTTGCATCTCTTGTCCTGATTGTGCTACTGGCCAGATATTTCTCAGGGCATACTAAAAACCCAGATGGGAGTGTTCAATTTAAAGCAGGAAAGACTAAAGTTGGTGATGCTGTTGATGGAGCAATTAAGATAGTAACTGTTGCGGTCACCATTGTCGTTGTTGCAGTTCCTGAAGGGCTTCCCTTAGCAGTGACCTTAACTTTGGCCTACTCAATGAGGAAGATGATGGCCGATAAAGCTTTGGTAAGGAGGCTTTCTGCCTGTGAGACAATGGGCTCTGCCACGACCATTTGCAGTGATAAGACTGGCACATTGACCATGAATCAGATGACAGTGGTCGAGGCTTATGCTGGTGGGAAAAAGATTGATCCTCCTCATAAGAAGTCAGAGCTCTCTCCCATGCTTCACTCTTTGCTCATTGAAGGTGTTGCACAGAACACCAACGGCAGTGTTTATGTACCCGAGGCTGGTAATGATGTCGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGCACTAAAGCTTGGGATGAATTTTACAGAATCTAGATCACAATCATCTATTGTCCATGTCTTTCCTTTCAATTCAGAGAAAAAACGTGGCGGAGTTGCAATAAAGACGGCTAACTCTGAAGTCCATATACATTGGAAAGGTGCTGCTGAGATAGTCCTAGCCTGCTGTACAGCGTATGTTGATGCAAATGAGCAGTTGGTGGAGATGGATGAGGAGAAGATGACATTTTACAAAAAAGCTATTGAAGACATGGCTTCTGATAGTCTACGTTGTGTTGCCATTGCATATAGACCATACGAGAAGGAGAGTGTTCCAACTAGTGAAGAACTACTTGCTCATTGGTCTTTACCGGAGGATAATCTTGTTTTACTTGCTATTGTTGGTCTTAAGGATCCTTGTCGACCTGGTGTCAAAAATGCAGTGCAGCTTTGCCAAAAAGCTGGGGTTAAGGTAAAAATGGTGACTGGTGACAATGTCAAAACTGCAAAAGCTATTGCTGTGGAATGTGGTATACTTGCTTCATTTGCTGATGCCACTGAGCCAACCATCATTGAAGGGAAAACATTCCGTGCCTTGTCAGATGCCCAGAGAGAAGAAATTGCTGAAGCGATATCGGTTATGGGACGATCATCTCCTAATGACAAGCTCTTGCTTGTGCAAGCATTGAGGAGGAAGGGACATGTTGTGGCTGTAACTGGGGATGGAACAAATGATGCTCCTGCACTACATGAGGCCGATATTGGTCTTGCAATGGGTATCCAAGGTACAGAAGTTGCCAAAGAGAGCTCTGATATCATTATTTTGGATGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGGCGGTCTGTATATGCCAATATTCAGAAATTTATCCAGTTTCAGCTTACTGTCAATGTGGCAGCTCTTGTTATAAATGTTGTTGCTGCAATTTCCTCTGGTGATGTCCCACTAAATGCAGTCCAGCTTCTCTGGGTAAACCTTATTATGGATACTCTGGGTGCACTAGCCTTGGCTACTGAACCACCAACTGATCACCTCATGGATCGTCCTCCAGTGGGTCGAAGAGAACCTCTCATTACAAATATCATGTGGAGAAATTTACTGATACAGGCTATGTACCAAGTGTCTGTCTTGCTTGTTCTCAATTTCCGAGGTGTGAGCATTCTGGGTCTTGGGCATGAGAAGCATGATCATGCGATCAAAGTAAAAAACACTTTGATCTTCAATGCATTTGTTTTCTCTCAAGTCTTTAATGAATTTAATGCACGAAAGCCAGATGAATTGAACATATTTAAGGGAGTTACTAAAAACTTGCTCTTTATGGGAATAGTGGGATTAACTGTCGTGCTTCAGGTCAGCACCATAAAAATTGCCTCTGTTTATCAGATTATCATCATTGAATTTCTTGGCAAGTTCACTACAACTGTCAGGCTTAATTGGCAGCAGTGGCTCATTTCTATCATCATTGGATTGATCAGTTGGCCTCTTGCTGTGGTTGGAAAATTCATACCAGTGCCAACAACTCCAATTAACAACGTTTTTTCAAGGTTGCCCGGTCGAGGAATGTTAAAAAAGAAGGGTGAACCTAATGCTTCTTAA 2352 0.4294 MTGESKIVHKDSRDPFLMSGCKVADGSGSMLVTGVGINTEWGLLMASISEDSGEETPLQVRLNGVATFIGIVGLSVASLVLIVLLARYFSGHTKNPDGSVQFKAGKTKVGDAVDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYAGGKKIDPPHKKSELSPMLHSLLIEGVAQNTNGSVYVPEAGNDVEVSGSPTEKAILHWALKLGMNFTESRSQSSIVHVFPFNSEKKRGGVAIKTANSEVHIHWKGAAEIVLACCTAYVDANEQLVEMDEEKMTFYKKAIEDMASDSLRCVAIAYRPYEKESVPTSEELLAHWSLPEDNLVLLAIVGLKDPCRPGVKNAVQLCQKAGVKVKMVTGDNVKTAKAIAVECGILASFADATEPTIIEGKTFRALSDAQREEIAEAISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRPPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGVSILGLGHEKHDHAIKVKNTLIFNAFVFSQVFNEFNARKPDELNIFKGVTKNLLFMGIVGLTVVLQVSTIKIASVYQIIIIEFLGKFTTTVRLNWQQWLISIIIGLISWPLAVVGKFIPVPTTPINNVFSRLPGRGMLKKKGEPNAS 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1221 783 Gene3D - 382 497 IPR023214 -
Lal21g1221 783 ProSitePatterns E1-E2 ATPases phosphorylation site. 175 181 IPR018303 -
Lal21g1221 783 SFLD Haloacid Dehalogenase 155 533 - -
Lal21g1221 783 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 756 IPR023298 -
Lal21g1221 783 PANTHER CATION TRANSPORTING ATPASE 1 771 - -
Lal21g1221 783 SFLD p-type atpase 155 533 IPR044492 -
Lal21g1221 783 SUPERFAMILY HAD-like 171 586 IPR036412 -
Lal21g1221 783 Gene3D - 226 381 IPR023299 GO:0000166
Lal21g1221 783 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 113 196 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal21g1221 783 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 447 561 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal21g1221 783 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 1 756 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lal21g1221 783 Pfam haloacid dehalogenase-like hydrolase 170 495 - -
Lal21g1221 783 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 179 386 IPR023299 GO:0000166
Lal21g1221 783 Pfam E1-E2 ATPase 1 151 - -
Lal21g1221 783 PANTHER CALCIUM-TRANSPORTING ATPASE 1 771 - -
Lal21g1221 783 SUPERFAMILY Calcium ATPase, transduction domain A 1 46 IPR008250 -
Lal21g1221 783 Pfam Cation transporting ATPase, C-terminus 566 753 IPR006068 -
Lal21g1221 783 PRINTS P-type cation-transporting ATPase superfamily signature 173 187 - -
Lal21g1221 783 PRINTS P-type cation-transporting ATPase superfamily signature 374 385 - -
Lal21g1221 783 PRINTS P-type cation-transporting ATPase superfamily signature 396 406 - -
Lal21g1221 783 PRINTS P-type cation-transporting ATPase superfamily signature 481 500 - -
Lal21g1221 783 PRINTS P-type cation-transporting ATPase superfamily signature 505 517 - -
Lal21g1221 783 Gene3D - 498 758 - -
Lal21g1221 783 Gene3D - 4 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1221 Lal-Chr21 15252353 15276700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1221 1 763 Primary Pumps ATPases AT5G57110 76.571 0.0 1195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1221 K01537 - gmx:100820121 1293.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1221 21 15252353 15276700 Lal21g1221 21 15252353 15276700 ECH
Lal17g1553 17 16956083 16976807 Lal21g1221 21 15252353 15276700 LSH