Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1191 ATGGAGAAGTTACCAAAGAACCAAGTTGTTCTTAAAATTGAAGAAATAGAAGAACCTTCATATGCAAAGAGAGAAAGTGAAAGCACTTCTATTTCCACTCAGCAAAACAAAGATTATACAAATGTAACAAACAATGTTCAAGTAACTTCATTCACAAGTTCCCCTTCTCCTGATTCCAAATACTCAAATAAGCCTCCAAAAGTTCCACCAGAATCCATAACTAGAAGAAGATCATTGCTGAGATCAGAGTTTTCAAAACCAAAGTCAAGATTGGTGGAACAATCATATCAAAGTGAAGTAAAATTTGTTGAAGAAAAGAACCATTTTACAAGTTCTAACTTATCTAATAGAAGTTCTCCTAATAAAGTTGCTACTACTCCAAAGGGTAATCATAGTCCAGTTCCTGTAACCCCGAGAACCCCGCGAACGCCGATGATTAGAGCAATGGAAGATGGTGAGGATGATGAGGATGATGAAGATGAGGAAGTGTACAAGATTGCTGATATTGAAGTGAGGAAGAGAAAAAGTAAGAAGTTGAAAGTTATGGTTTTGATTGAATGGTTTGTTTTTGTTTGCATAATGGGTTTATTGATTGTAAGTTTGAGTGTTGATAAGTTGAAAAATGTTGTGATTTGGAGTTTAGAATTGTGGAAATGGTGTGTGCTAGTTATGGTTATAGTATGTGGTAGAATGGTAACAAGGTGGTTTATGAATGCTTTGGTTTTCATGGTTGAAATGAACTTCTTTTGGCTTAAGAAAAAAGTTCTATATTTCATTTATGGTGTGAAGAAGAGTGTTAGAGTTTTCATTTGGTTGAGTTTGGTTCTTCTAGCTTGGGGACTTTTGTTCAACCGCGGAGTTACGAGATCGAAAAAGACTAATAAGATTCTGAATTACATAACTAGAGCCCTTGCTTCATGTCTCATTGGTGCAGCAATATGGCTAGTGAAAACTTTGCTGATAAAGTTGTTAGCTTCTTCATTCCAATGCACTAGATTCTTTGATAGGATTCAAGAATCATTCTTCCATCAATATATTCTAAGGACACTTTCGGGGCAACCCTTAATGGAGATGGCTGAAATGGTAGGGAAAGTTGCAAGTACTGGCCAACTTAGTTTTAGGACTATGAATGGAAACAAAGAAGGGAAAAAAGAAGAGGTTATTGATGTAGACAAACTCAAGAAAATGAAACAAGACAAAGTTTCAGCATTGACTATGAAAAGTTTGGTTAATGTTATTAGGACTTCAGGGTTATCTACAATATCTAATACACTAGAGAGTGTTGATGAAGAGGAGCAGGAAGACAAAGAAATCACTAGCGAATGGGAAGCGAAAGCCGCCGCGTATCGGATATTCAAGAATGTAGCCAAACCAGGAAACAAGTACATTGAAGAAGAGGATCTTTTGCGCTTTATGAATAAAGATGAGGTTGATAATTTGCTTCCTCTATTTGAAGGAGCTTCTGGAACCGGAAAGATTAAAAGAAAATCTCTCAAGAACTGGCTGGTTAAGGTCTATCTCGAACGCAAATCATTGGTGCATTCCTTAAATGATACAAAAACAGCAGTTGATGAATTGAACAACATTGCTTCAGTGGTTGTCCTGATTGTGATTCTTATCGCGTGGTTGCTTATGATGGGATTCTTGACAACACAAGTGCTTGTGTTCATTTCATCTCAGCTTTTACTGGCAGGGTTTATGTTTGGCAACACGGCTAAGACCGTGTTCGAAGCCATCGTATTCGTGTTTGTTATGCATCCATTCGATGTTGGAGATCGTTGCGTCATCGATGGAGTTCAGATGGTTGTTGAAGAGATGAATATTTTGACAACAGTTTTCTTGAGATTTGACAATGAAAAGATATTCTATCCAAATTCAGTTCTATCCACCAAACCAATCAGCAACTTTTACAGGAGTCCAGAGATGAGTGATTCAGTTGAATTTGCAGTTGATTTTTCTACCACAATTGAGACTATTGGAGCCTTAAAAGCTAGAATTAAAGGTTACTTGGAGAGCAAGCCACAACATTGGCGTGCAGGACACAATGTGATAGTGAAAGATATTGAGAATGTAGACAAAATGAAAATGGCTCTATATGTTACTCATACCATAAATTTTCAGAATTATGGTGAGAAAAATAGTAGAAGATCTGAATTAGTTCTTGAGTTGAAGAAAATCTTTGAAGATCTCAAAATTAAATATAATTTGCTACCACAACAAGTTCATCTCAATCATATTGGAGGAGGAGCTTCATAG 2256 0.3648 MEKLPKNQVVLKIEEIEEPSYAKRESESTSISTQQNKDYTNVTNNVQVTSFTSSPSPDSKYSNKPPKVPPESITRRRSLLRSEFSKPKSRLVEQSYQSEVKFVEEKNHFTSSNLSNRSSPNKVATTPKGNHSPVPVTPRTPRTPMIRAMEDGEDDEDDEDEEVYKIADIEVRKRKSKKLKVMVLIEWFVFVCIMGLLIVSLSVDKLKNVVIWSLELWKWCVLVMVIVCGRMVTRWFMNALVFMVEMNFFWLKKKVLYFIYGVKKSVRVFIWLSLVLLAWGLLFNRGVTRSKKTNKILNYITRALASCLIGAAIWLVKTLLIKLLASSFQCTRFFDRIQESFFHQYILRTLSGQPLMEMAEMVGKVASTGQLSFRTMNGNKEGKKEEVIDVDKLKKMKQDKVSALTMKSLVNVIRTSGLSTISNTLESVDEEEQEDKEITSEWEAKAAAYRIFKNVAKPGNKYIEEEDLLRFMNKDEVDNLLPLFEGASGTGKIKRKSLKNWLVKVYLERKSLVHSLNDTKTAVDELNNIASVVVLIVILIAWLLMMGFLTTQVLVFISSQLLLAGFMFGNTAKTVFEAIVFVFVMHPFDVGDRCVIDGVQMVVEEMNILTTVFLRFDNEKIFYPNSVLSTKPISNFYRSPEMSDSVEFAVDFSTTIETIGALKARIKGYLESKPQHWRAGHNVIVKDIENVDKMKMALYVTHTINFQNYGEKNSRRSELVLELKKIFEDLKIKYNLLPQQVHLNHIGGGAS 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1191 751 MobiDBLite consensus disorder prediction 109 144 - -
Lal21g1191 751 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 6 745 IPR016688 -
Lal21g1191 751 Gene3D - 587 636 IPR023408 -
Lal21g1191 751 MobiDBLite consensus disorder prediction 20 90 - -
Lal21g1191 751 PIRSF Memb_At2g17000 3 747 IPR016688 -
Lal21g1191 751 Pfam Mechanosensitive ion channel 527 733 IPR006685 GO:0016020|GO:0055085
Lal21g1191 751 SUPERFAMILY Sm-like ribonucleoproteins 577 636 IPR010920 -
Lal21g1191 751 MobiDBLite consensus disorder prediction 25 61 - -
Lal21g1191 751 MobiDBLite consensus disorder prediction 109 133 - -
Lal21g1191 751 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 6 745 - -
Lal21g1191 751 MobiDBLite consensus disorder prediction 70 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1191 Lal-Chr21 14707153 14712397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1191 51 743 Mechanosensitive Ion Channel Family AT5G12080 52.624 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1191 K22048 - qsu:112023488 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1191 21 14707153 14712397 Lal21g1191 21 14707153 14712397 ECH