Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1183 ATGGCCGCTGTTCGCTTATTCCCTCTCATCCTCATCATCGTTATCGTCATCACCAGTCTCATCCATCTGGCCCTCTCGGTATCCGAAACCGAGCCCCTCATGAAACTTAAACAATCTTTCACCAATGCAGACAACTCTTTATCTTCATGGATCCAAAATGTAACCCCATGTGGAAATTGGGTTGGTGTTGTTTGCTTCAGAAACATCATCACTGGTTTGCATCTCTCAGATTTAGGTCTTTCTGGAAAAATAGACGTTGATGCCCTAATGCAGATTCCTACTATACGTACTATAAGCTTTGTTAACAATTCTTTCTCAGGTTCAATACCACAGTTCAATAAACTTGGTGCCATAAAATCATTATACTTAACAAATAACCAGTTTTCTGGTCCCATTCCTTTGGAATTTTTCTCACAACTAGGTTCTTTAAAGAAAGTATGGCTCTCAAATAATAAATTTTCAGGTGATATACCTCAATCTTTAACTGAACTTGACCTTCTCAAAGAATTGCACCTTGAGAACAATGAGTTTTCTGGTCAAATACCATTTCTCAAGCAACAAATGACATCATTTGATGTGTCAAATAACAAGTTAGAAGGTATGATACCTGAGAATTTGGTGGGTTATGGTGCTAAATCATTCACTGGGAATGAAAAACTTTGTGGGAAGCCTTTGGATAAGGCTTGTGATTATTATACATTACCTACAGGAGGAGAGAATAGTGGAGGGTATCTTACAGGTTTGGGTGTTAAGGTTATTGTGATACTTGTGTTTGCGGTTGCTGCAGCTTTGATTGTCTTGTTTATGAAGAATAAGAAGCGAAATGAGCATGATTTCAGCATTATCAGCAGGAGTAATAGCAGCATTGATGAAGATCAGCTGCATCAGGTGGTGCAAGTTCATGCACCAAGCTCAAAGAATAGCAAGTTCTCAACAAATAGCAGCAAAAAGGGTAGTAGCCATGGTGAGCACAAGAGTGAGTCCAAAAGAGCATCAACCACAAGGGCTGGTAGCATGGGTGACCTTGTAATGGTGAATGATGAAAAGGGTGTTTTTGGTTTAGCAGATTTGATGAAAGCTGCTGCAGAAGTTCTAGGAAATGGTGGGTTAGGTTCAGCATACAAGGCTGCAATGGCAAATGGGTTATCTGTGGTAGTTAAGAGAATGAGAGAGATGAATAAGATTGGAAGAGATGTTTTTGATGCTGAAATGAGACAGTTTGGGAGGATCAGACATAACAATATATTGAACCCTCTTGCTTACCATTATAGGAGAGAAGAGAAGCTTTATGTCACAGAATATATACCAAAAGGAAGCTTGTTATATGTCTTGCATGGTGACAGAGGATCATGTCATGCTGATCTAAATTGGCCTACTCGTTTGAAGATTGTTAAAGGAATTGCAAGAGGTTGTGGCTTTCTATATACTGAATTTTCTAACTATGATCTACCACATGGAAACCTTAAATCTAGCAATGTTCTATTAAGTGATGATTATGAAGCACTTCTAAGTGAATATGCATTTTATCCATTAATCAATCCAAATGCTGTGCAATCAATGTTTGCTTACAAAACCACAGATTACACACAATACCAGAAAGTTTCACAAAAGACTGATGTGTATTGTCTCGGCATCATCATTCTCGAAATCATTACGGGCAAGTTCCCATCTCAGTATCATAGCAATGGAAAGGGTGGTACTGATGTTGTGCAATGGGTGTTCACGGCGATTTCCGAGAGAACAGAAGAAGAATTGATCGACCCGGAGTTAAAAAACAATACAAGTTCGCTCAATCAGATGTTGCAGCTTATCCAAATTGGGGCTGCTTGCGCAGAAAGCAACCCCGAACAAAGAATTACAATGAAAGAAGCTATTAGAAGGATAGAGGAAGAGCATTACAAATCTATACAAGTCTACTCCCTTAAAAGTATTCTTATCATTGTTGATTTCATGTGA 1956 0.3875 MAAVRLFPLILIIVIVITSLIHLALSVSETEPLMKLKQSFTNADNSLSSWIQNVTPCGNWVGVVCFRNIITGLHLSDLGLSGKIDVDALMQIPTIRTISFVNNSFSGSIPQFNKLGAIKSLYLTNNQFSGPIPLEFFSQLGSLKKVWLSNNKFSGDIPQSLTELDLLKELHLENNEFSGQIPFLKQQMTSFDVSNNKLEGMIPENLVGYGAKSFTGNEKLCGKPLDKACDYYTLPTGGENSGGYLTGLGVKVIVILVFAVAAALIVLFMKNKKRNEHDFSIISRSNSSIDEDQLHQVVQVHAPSSKNSKFSTNSSKKGSSHGEHKSESKRASTTRAGSMGDLVMVNDEKGVFGLADLMKAAAEVLGNGGLGSAYKAAMANGLSVVVKRMREMNKIGRDVFDAEMRQFGRIRHNNILNPLAYHYRREEKLYVTEYIPKGSLLYVLHGDRGSCHADLNWPTRLKIVKGIARGCGFLYTEFSNYDLPHGNLKSSNVLLSDDYEALLSEYAFYPLINPNAVQSMFAYKTTDYTQYQKVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVFTAISERTEEELIDPELKNNTSSLNQMLQLIQIGAACAESNPEQRITMKEAIRRIEEEHYKSIQVYSLKSILIIVDFM 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1183 651 MobiDBLite consensus disorder prediction 301 334 - -
Lal21g1183 651 MobiDBLite consensus disorder prediction 301 317 - -
Lal21g1183 651 SUPERFAMILY L domain-like 27 208 - -
Lal21g1183 651 SUPERFAMILY Protein kinase-like (PK-like) 363 628 IPR011009 -
Lal21g1183 651 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Lal21g1183 651 Gene3D Phosphorylase Kinase; domain 1 324 434 - -
Lal21g1183 651 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 631 - -
Lal21g1183 651 PANTHER LRR RECEPTOR-LIKE KINASE 10 631 - -
Lal21g1183 651 Gene3D Ribonuclease Inhibitor 188 227 IPR032675 -
Lal21g1183 651 ProSiteProfiles Protein kinase domain profile. 359 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g1183 651 Gene3D Transferase(Phosphotransferase) domain 1 435 643 - -
Lal21g1183 651 Pfam Protein tyrosine and serine/threonine kinase 363 626 IPR001245 GO:0004672|GO:0006468
Lal21g1183 651 Gene3D Ribonuclease Inhibitor 27 186 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1183 Lal-Chr21 14646302 14650564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1183 1 629 Receptor kinase-like Gene Family AT3G42880 50.000 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal21g1183 PK_Tyr_Ser-Thr 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1183 - - gmx:100788667 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1183 21 14646302 14650564 Lal21g1183 21 14646302 14650564 ECH
Lal14g1640 14 16756360 16758706 Lal21g1183 21 14646302 14650564 PCT
Lal19g1188 19 15308207 15310806 Lal21g1183 21 14646302 14650564 PCT
Lal21g1183 21 14646302 14650564 Lal14g1640 14 16756360 16758706 PCT
Lal21g1183 21 14646302 14650564 Lal19g1188 19 15308207 15310806 PCT