Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1177 ATGGCCAAAGGAGAAGGAAAACTAACAAAACTTAAGTCAGTTCTCAAGAAATGGAACTCATTCACTACCAACAACAACAATAAGGAGAGCCACCATAGCATCAACACAGTCACCAACCACGTGTCCTCCTCCTCCTCCTCTTCCACCTTGAGTTCAGAGCTCCGCCCTGTCTACGTCGGCAAGACACGGCGGCGATACCTTGTTAGTTCTGATGTTGTCCAACATCCCCTATTTCAGGAGCTAGTGGACAAGTCAGACGATGATGATGTGGAAGAAGACACAATCAACGTGGCATGTGAGGTTGTCTTGTTCCAACACTTTCTTTGGATGCTCCAGAATGCTCATCCGAAACCCGAGTCTTCGGATGAGCTTCTCGAGTTTTATGCCTAG 390 0.4744 MAKGEGKLTKLKSVLKKWNSFTTNNNNKESHHSINTVTNHVSSSSSSSTLSSELRPVYVGKTRRRYLVSSDVVQHPLFQELVDKSDDDDVEEDTINVACEVVLFQHFLWMLQNAHPKPESSDELLEFYA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1177 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 129 IPR003676 GO:0009733
Lal21g1177 129 Pfam Auxin responsive protein 16 111 IPR003676 GO:0009733
Lal21g1177 129 MobiDBLite consensus disorder prediction 22 52 - -
Lal21g1177 129 PANTHER SMALL AUXIN-UP RNA-RELATED 5 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1177 Lal-Chr21 14482360 14482749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1177 4 123 Calmodulin-binding Proteins AT3G43120 25.694 1.73e-09 51.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1177 21 14482360 14482749 Lal21g1177 21 14482360 14482749 ECH