Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1156 ATGGAACAGTTGAAATTTGCTGCAGAATTTGTGGCCAAAGAGGACTCTCCTTTTCGGTACAAGCGAAAAATTAACAATGCATTAGAGTCATCTACCAGTCCAATAAGTAGAAAGGTGTCAGCTACATGGGATCCAGTTGAAGCATGTCGGCCTATGATTGATGAAGCGCCTGTATTTCATCCGACTATTGAGGAGTTTGAGGATACATTGGGTTACATAGCAAAGATTCGACCCTTAGCTGAACCCCATGGCATATGTAGGATTGTCCCTCCAGCTTGCTGGAATCCACCTTGCCCTCTTAAGGAGAAAGACCTATGGGAAAATACTAAATTTCCTACCCGAATTCAGAATATCGATTTGCTTCAAAATAGGGAGCCCATGAGGAAGAAAAGTAGGGGAAGGAAACGAAAACGTAGAAAGCACTCCAAAATGGGCACATGTAGGAGACCTGCTAATTCAGGTTCTGAAGCTAATACTCCTTCTGATCCCGATGAGAAGTTTGGATTCCAATCCGGGTCGGACTTCACGCTTAAAGACTTTCAGCAATATGATAAGTTTTTTAAGGAATGCTACTTCAGGTTGAAAGACGCTAATGAAGATGGAAAAATTAGTAATAGTAACAGCCAGAAGAGATGGGAGCCCTCTGAGGAGGAAATTGAAGGCGAATACTGGCGAATAATTGAGCAACCAACGGATGAGGTTGAGGTGTATTATGGAGCTGACTTGGAAAGTGGTGCACTTGGAAGTGGTTTTCCAAAGGCATCTTCCTTAACTAAGAGCGGTTCAGATCAGTATGCCTTATCTGGCTGGAATCTCAATAACTTCCCCCGACTCCCAGGTTCCGTACTAAGTTTTGAAGGAAGTGACATCTCAGGAGTTCTAGTGCCATGGCTCTATGTTGGCATGTGCTTTTCATCATTTTGCTGGCATGTTGAGGATCACCACCTCTATTCGCTTAATTATCTGCACTGGGGTGACCCAAAAGTATGGTATGGAGTGCCTGGAAGCCATGCTTCACCTTTTGAAGATGCAATGAGGAAGCACTTGCCTGATTTATTTGAGGAAAATCCAAATCTACTCAATGAACTGGTTACTCAGTTATCTCCTTCAGTCCTTAAATCTGAGGGAGTACCTTTATATCGCACTGTACAGCATTCTGGGGAATTTGTTATTACATTTCCAAGGGCATACCACTCTGGCTTCAATTGTGGATTCAACTGTGCTGAGGCAGTGAATGTGGCTCCCGTTGATTGGTTAATGCATGGTCAGAATGCCGTTGAGCTTTACAGTTTGCAGTGCCGTAAGACATCATTGTCACATGACAAGCTTTTATTTGGATCGGCACAGGAAGCTGTACGAGCTCTTGCAGAGCTAGCTCATCTCGGAAAGGAAACTCCTAAGATTTTAAAATGGAAAAGTGTCTGTGGGAAAGATGGAGTTCTTACCAAGGCAGTTAAGACAAGGATAAAGATGGAAGAAGAGCGGCTGGATTGTCTTGCAACTGATATAAAGTTGCTGAAGATGGACAGTGACTTCGATTTGTACAAGGAAAGGGAATGCTTCTCTTGCTTCTATGACTTGCACCTATCTGCTGTAGGTTGCGAGTGCTCTCCTGACAGATATTCTTGTCTTAAGCATTCAAATTTGTTTTGCTCATGTGGAATGGACAGAAGATTCGTTCTGCTTCGTTATACTACAGATGAACTAAATAAATTGGTTGATGCATTAGAAGGACAATCACCTGCTATTGAAGTTTGGGCAAATAAAAATCTCGGAATGGTTTGTTCTGATGGCAATAAGGTTTCCATATGTAAACCAGATGTGGAGAGAGACGCATACAAGACCAAGAGTCGTGAAGATGGGGAAAGCTCAACTGGTTGTGCAGGAACCAAGGATGGTCATAATGACAATATTAATGATAAAAAGTTGGACATAGACAATGAAGATAATGTGGATCGGGCTGGTTGTCTGGATTTGAATCTTGAAGTTATATCCGGTGAGAATGAAAATTACTTGCTGCATATTTCGGATAGCCAACATAATATGGGTGTTTTAATAGAGGAAAAAGTATGCCATTCAGGGTATGGAAAGGAACAAGGTAACATGGATCTTGGTGGTGAGGGTAACCTGTCACATATGTTTTCAGTTTCAAAGACAGGTTTTTCATCATTGTCAAGGGATACCCGCAATTCTTTTACATTTGGTGGCGGAAAGTTTGGGTTGGATCTGCAAATGGATTCAAATTCAGGAAAGCAGCCGCACAATGTATGCAAAATGGAATTCATAGACACCACAAATACAAGTATATCTTCAACTGACGAAAGCTACCTAATGCAAACGTTTGGTAATTCTGTCCAGCCTATAAGTTTGGGTTCGGTTGTTTATGGAAAGCCATGGTCTAGTAGGCACACAATATATACGAAAGGATTCAAGAGTCGAGTTAATTTCTTTAGCATTCTTGATCCTGCAAGAATCTCTGGCTACGTTTCTGAAATCATTGATGCTGGATTTCTTGGACCAATTTTCAAGAACTTTTGGAGAAACTCAGTGGCTGCTAATTTTTCATTGTCAGTTTATGTAGTGGCGTCTTTGCCTGAAATTGTTGAATCAGATGAAACGGTTACGATGGAAGAACATCCAAGCGAGACGTTCACTGATATCTCAGCAGATAAGTGCTGGGAATCAGTTCTAAAGAGACTACATAATGAAATTATGAGGCGAAGGAGTCTAGGTGAAAAGGAACTCCCTCCCTTAGAGCTTTTGAAGAACATCAACGGTCTTAGAATGTTCGGCTTCCTTTCACCTTCCATTATTCAGGCCATCGAAGCTCGAGATCTCAGTCACGAGTGTGTAGAGTACTGGAATCACAAAGTTGTCTCTTCATCATCATGCAGTGACATTGATAATAAGTTCACTCATTGTTCAAGTAACTCTCTTGGTAACGTCAACACCAAAGTTTTTGGTGTCAATTTGATTAAGCAGGAAGAGGATAGCATAAGAGGAAGTTTTCATTCCCTTGAGATGAAATCATTACTAAAAGGATCCCTTAAATCTTGA 3057 0.4141 MEQLKFAAEFVAKEDSPFRYKRKINNALESSTSPISRKVSATWDPVEACRPMIDEAPVFHPTIEEFEDTLGYIAKIRPLAEPHGICRIVPPACWNPPCPLKEKDLWENTKFPTRIQNIDLLQNREPMRKKSRGRKRKRRKHSKMGTCRRPANSGSEANTPSDPDEKFGFQSGSDFTLKDFQQYDKFFKECYFRLKDANEDGKISNSNSQKRWEPSEEEIEGEYWRIIEQPTDEVEVYYGADLESGALGSGFPKASSLTKSGSDQYALSGWNLNNFPRLPGSVLSFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHASPFEDAMRKHLPDLFEENPNLLNELVTQLSPSVLKSEGVPLYRTVQHSGEFVITFPRAYHSGFNCGFNCAEAVNVAPVDWLMHGQNAVELYSLQCRKTSLSHDKLLFGSAQEAVRALAELAHLGKETPKILKWKSVCGKDGVLTKAVKTRIKMEEERLDCLATDIKLLKMDSDFDLYKERECFSCFYDLHLSAVGCECSPDRYSCLKHSNLFCSCGMDRRFVLLRYTTDELNKLVDALEGQSPAIEVWANKNLGMVCSDGNKVSICKPDVERDAYKTKSREDGESSTGCAGTKDGHNDNINDKKLDIDNEDNVDRAGCLDLNLEVISGENENYLLHISDSQHNMGVLIEEKVCHSGYGKEQGNMDLGGEGNLSHMFSVSKTGFSSLSRDTRNSFTFGGGKFGLDLQMDSNSGKQPHNVCKMEFIDTTNTSISSTDESYLMQTFGNSVQPISLGSVVYGKPWSSRHTIYTKGFKSRVNFFSILDPARISGYVSEIIDAGFLGPIFKNFWRNSVAANFSLSVYVVASLPEIVESDETVTMEEHPSETFTDISADKCWESVLKRLHNEIMRRRSLGEKELPPLELLKNINGLRMFGFLSPSIIQAIEARDLSHECVEYWNHKVVSSSSCSDIDNKFTHCSSNSLGNVNTKVFGVNLIKQEEDSIRGSFHSLEMKSLLKGSLKS 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1156 1018 SMART fyrc_3 874 965 IPR003889 GO:0005634
Lal21g1156 1018 Gene3D - 782 951 - -
Lal21g1156 1018 SMART JmjN_1 55 96 IPR003349 -
Lal21g1156 1018 SMART fyrn_3 791 835 IPR003888 GO:0005634
Lal21g1156 1018 PANTHER LYSINE-SPECIFIC DEMETHYLASE 630 1017 - -
Lal21g1156 1018 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 635 - -
Lal21g1156 1018 Pfam F/Y-rich N-terminus 788 832 IPR003888 GO:0005634
Lal21g1156 1018 Pfam F/Y rich C-terminus 874 956 IPR003889 GO:0005634
Lal21g1156 1018 ProSiteProfiles FYR domain FYRN motif profile. 777 835 IPR003888 GO:0005634
Lal21g1156 1018 SUPERFAMILY Clavaminate synthase-like 268 452 - -
Lal21g1156 1018 Pfam JmjC domain, hydroxylase 297 413 IPR003347 -
Lal21g1156 1018 ProSiteProfiles JmjC domain profile. 264 430 IPR003347 -
Lal21g1156 1018 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Lal21g1156 1018 ProSiteProfiles FYR domain FYRC motif profile. 862 957 IPR003889 GO:0005634
Lal21g1156 1018 MobiDBLite consensus disorder prediction 614 633 - -
Lal21g1156 1018 Gene3D Cupin 41 414 - -
Lal21g1156 1018 SMART cupin_9 264 430 IPR003347 -
Lal21g1156 1018 Pfam C5HC2 zinc finger 520 572 IPR004198 -
Lal21g1156 1018 Pfam jmjN domain 57 90 IPR003349 -
Lal21g1156 1018 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 10 635 - -
Lal21g1156 1018 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 630 1017 - -
Lal21g1156 1018 MobiDBLite consensus disorder prediction 120 170 - -
Lal21g1156 1018 MobiDBLite consensus disorder prediction 128 146 - -
Lal21g1156 1018 MobiDBLite consensus disorder prediction 148 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1156 Lal-Chr21 14213847 14222866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1156 64 959 JUMONJI Transcription Factor Family AT4G20400 49.224 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lal21g1156 JmjC 4.1e-46 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1156 - - gmx:100801775 1455.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1156 21 14213847 14222866 Lal4g1443 4 18608451 18618806 LSH