Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1133 ATGGCGTTTGATCAAAATTCCATTCCCAATATGAACCGAACCATAGCACAAGAGCCACTCGTTTTGCCGACAAGTACGATCTCGGTTCGAACTGGAGAGTGTTGTTTCGCTCCGGTTCGAACCGGAGAGTGTTGTTTCGCTCCGGTTCGAACCGGAGAGGGTTGTTTCGCTCCGGTTCGAACCGGAGAATGTTATGGTAGTCCTCCAGGTTTGGTTGGAATTGGTCATAAAAATGTGACTTCTTCCGGTGGTAATTGGTGTGTACGACCTGCTGTGCCGGTTGCCCATCCCACTATGAACCCTGGTATTGGGTTTAACTATGGTCATAGTTTTCTCAATCCAATTGCTGGTGGCAATGGTGTTGTTGATGTTTCGGGTCGTGTCGTGGCGAGTGAAGGTGGGTATCCTATGAATTTGGTTAATCTTGTTGTGGGTAATGGTTTGGATAATGCTCTTCAGGTTAAGGAAAAAGTGATTAGTAATAATGTTAGTGATCAGATTGGTGTTGTTGTGTCAACAAGGGTTGATCATCAGGTTAGTGATGAGGGTGGGGACGATTCGATTTCGGAGAAAAAATTGAAGTTGATGTGTAGTTATGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGAGGGCAGACAAGGATCATAAGTGTAAAGAGACATATGAGTTTCAGTGAATTGATGCAAAAGATGGTTGATACTTATGGCCAGCCTGTAATTATCAAGTATCAGCTCCCGGATGAGGAACTTGATGCATTGGTTTCGGTTTCGTGCACCGATGATCTCGAGAATATGGTTGAAGAGTATGAAAGGTTAGTTGAGAGGTCTCCTGATGGTTCAGCTAAATTAAGGGTGTTTCTGTTTTCTGCTTCCGAACTGGATTCTTCTGGTGTGATACAGTTTGATGACTTGCTGGATAGTGGGCAGAAATATGTCGAAGCTGTGAATGGAATTACAGATGGGATTAGTGACAAACTCATAAGAAAAGAGAGTTTTACAAGTGCAGCGTCGACCCAAAGTTCGGACTTGAGTGGTATAGAGGCTCGTGATAGTTCGAATGCTGGTCAAGTGGATGTTAGTGGGGCACCTAGGTCTGATGTTTTATCGCCTGAGGGGATTGTGGCTGATGTTTCTCAAGATTCTATTGCAAATTTGGTTGTTTCTGAGCCTGCCATATCAATCTACTCAGACACTTCTGCGGTTTCATCGTGCATGCTGGCTTCTAATTCTGGTCCTACTAGCAATTCACCCTTCCAGAATGAGGTTGAGTTAGAAAAATCTTTACCTGCTACTGTAACCCAGCAGCAACTTAGATTGCAGCGAGGTGGAATGGAAATTCCACTTCCTGCACCTTATTTGCAGCCTTTAGTCGATCCTCGCCAAGAAGTTATGAGTCAAGCAGATTATGTCAAGATGCATCCCCAGATGGGCTTTCCAAATCCTCAACTTTTAGGTAATACTGGGTCTCTGTACTCTCAACATCAGTTTCATGATACTACTCCCGGTTTAGTGTCTCGTCAGGTGATCCCTGGCCCTGCGGTGCAAATGACGACTCGGCCAACTTCTCATGTTGGTGTAGGACCAAATGTCATTCAACCGCAACAATTGATTCAACCACAGCAAAATCGTTTGGACCAATATAATGACGAAAATACATCAGGGGCAAGGATTATCCATCTTCCAGCTGAACAAAGCTACAACGCCTACCCGGTTCAATTCCCTTCTGTCGTAGTTGGAGGTAATTATCGCTGGGTTCAAGTTCCTCAACCAGAGCATGTTGTTTTCACTGATGCATTATTACCTCAACAACCAGCAATGATCCCTGAGAAAGTCCAAAGAGTGGAGGAATGTTATATGTGTCAGAACAAACTTCCTCATGCACATTCAGATCCAGTGATTCAGGATCAGCGTAATAGTTTTGCAGGTCTGATTCCTGACTCAATTCCAAGTTACCATAGTGTCCCTGTGGAGGACAACTTAAAAGCTCAAGCAACAAATAGGATTTTGGTTACTTCACCATTGAAGGAAGGCAATGTTGAACAAGTGGTTAGGTCCAGACCCATGGTCATTAACATATTGGAATCATCGGATGGAGTACCTTGTGCTGATACAACAGCTCTAAATCATAATCTTGAGCTGGAGCCTATAGGTGAGAGGAATTTTATACAAAAGCCAGACGGTTTTGATCATTCCAGGAATGCAATTATCCAGGAAGCAATTGGGAGAACAGTAGAAAAACAGTCACCAAGTCATGGGCTCACGGGAACAGCACCACTGTCTTACGATGTCATCAACCAGCATGTGGTGCCAGTTGAAAACTGCGCTAAAGAGGATATGTTTGTGAATAAAAATGTTACTAATGCTATACCTTTAGTCGGTGTCTCATCTGTTGAAATTTCTCAGTGTGTGGTTCAGGAGTCTCCTCAAGAACATACTAATGAACTGGCTAGCATTGTTTCAAAAGAAGATGCTGTGGGGAATTGGATTACACAGGATCATCTCAAATCTGCTGATAGAAGGGTGGGCATCCTCAACTTAGGTAATCCTGAAATTCATGTAAATAATGATAAACTTGATTATAACACTCAGCATGCTGTAGAGAAGAAAGGGGTGTTTATGGATAACAACCTTGGCGGGTCTAAATTGACTGTTGGTGCAAATCAAATTCAGATGATGGATGTGCTTCCTAGTTCTACTATGGAAATTTCATATGGAAATAATTGCATGCCTGTTGAACATAGTGAGGTTGCACAACCCCCTGTTTGGGGTGTTCCTGGATCAAATCTTCAATCAAGTAGTGGAAACCATCACCCGGATGATTCAATTTCTTCTTTGATTTCACCATCTGTCAAATTCGGAAATGAGCAGGATTCTTCAAGCTCCCTTTTTAGTAATCAGGACCCCTGGAATCTACATGGCACCTACTTTCCGCCACCCAAACCTAAAAAAATTGCATTGAAGAAAGAAATGTATCCTTATAACAATCAGTTTGGTGAGAATCCTGGCAACGGTGGAGAACAAAATTTAGAATCTCAATTGGATGATGGCCTCTACCAGATGTTCAGACAGAATTTAACTTCAGACGATGTTCAATCCTCTAAGGGTTCATCAGAAGACCGACAGAACCAACAGCTTCAAGCTGTTGCTGAAGGTGTAGCTGCTTCTGTTCTGCACTCAAGCACTCCTTCAAATCCTGACTTGCATGCCAGAGATGTGTCCCATCATGAAGACATTGATAATAGAGATTCTCAAACTAATCTAATTGATATACAATGTAATGATAGAACTCAGGTTGTCAAGACCAAGCTGCCAGAGAAGGCAAATTTCAGCTTTCCAGCATCAGATATTGGATCATTGCAGGTTATAAAGAATTATGACCTTGAAGAGCTTATAGAATTGGGTTCTGGGACCTTTGGTACTGTATATCATGGAAAATGGAGGGGTACTGATGTTGCAATTAAGCGGATTAATGATAGGTGTTTTGCTGGAAAGCCTTCAGAGCAAGAACGCTTGAGAACTGACTTTTGGAATGAGGCAATTAAGCTTGCTGACTTGCACCATCCAAATGTGGTAGCTTTCTATGGTGTTGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACAGAGTATATGGTTAATGGTTCTCTAAGAAATGCGTTGCAGAAGAATGAGAGGAATTGTGACAAGCGCAAGCGTCATATGATTGCAATGGATGCAGCATTTGGTATGGAGTACCTGCATGGGAAAAACATAGTACATTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCGATATGCAAGGTTGGTGACTTGGGTCTATCCAAAGTGAAATGTCAGACATTGATATCTGGTGGTGTTAGAGGAACTCTACCTTGGATGGCCCCAGAACTGCTGAGCGGAAGCAGTAGCCTTGTTTCAGAAAAGGTTGATGTGTTTTCTTTTGGTATTGTCATGTGGGAACTCCTCACTGGAGAAGAGCCATATGCTGATTTGCACTATGGGGCTATCATTGGTGGTATTGTAACTAACACGTTGCGGCCTCCGGTTCCAGAATCTTGTGATCCTGAATGGAGATTTTTGATGGAGAGGTGCTGGTCATCAGAGCCATCAGAAAGACCAACCTTCACTGAGATTGCCAATCAATTACGTTTCATGGCATCGAAGATCCCTCCCAAAGGTCAAAATCAACAGCAGCAACCTGCTTCATTGCAGAGCCAAGTGCAGAAATGA 4272 0.4309 MAFDQNSIPNMNRTIAQEPLVLPTSTISVRTGECCFAPVRTGECCFAPVRTGEGCFAPVRTGECYGSPPGLVGIGHKNVTSSGGNWCVRPAVPVAHPTMNPGIGFNYGHSFLNPIAGGNGVVDVSGRVVASEGGYPMNLVNLVVGNGLDNALQVKEKVISNNVSDQIGVVVSTRVDHQVSDEGGDDSISEKKLKLMCSYGGKILPRPSDGMLRYVGGQTRIISVKRHMSFSELMQKMVDTYGQPVIIKYQLPDEELDALVSVSCTDDLENMVEEYERLVERSPDGSAKLRVFLFSASELDSSGVIQFDDLLDSGQKYVEAVNGITDGISDKLIRKESFTSAASTQSSDLSGIEARDSSNAGQVDVSGAPRSDVLSPEGIVADVSQDSIANLVVSEPAISIYSDTSAVSSCMLASNSGPTSNSPFQNEVELEKSLPATVTQQQLRLQRGGMEIPLPAPYLQPLVDPRQEVMSQADYVKMHPQMGFPNPQLLGNTGSLYSQHQFHDTTPGLVSRQVIPGPAVQMTTRPTSHVGVGPNVIQPQQLIQPQQNRLDQYNDENTSGARIIHLPAEQSYNAYPVQFPSVVVGGNYRWVQVPQPEHVVFTDALLPQQPAMIPEKVQRVEECYMCQNKLPHAHSDPVIQDQRNSFAGLIPDSIPSYHSVPVEDNLKAQATNRILVTSPLKEGNVEQVVRSRPMVINILESSDGVPCADTTALNHNLELEPIGERNFIQKPDGFDHSRNAIIQEAIGRTVEKQSPSHGLTGTAPLSYDVINQHVVPVENCAKEDMFVNKNVTNAIPLVGVSSVEISQCVVQESPQEHTNELASIVSKEDAVGNWITQDHLKSADRRVGILNLGNPEIHVNNDKLDYNTQHAVEKKGVFMDNNLGGSKLTVGANQIQMMDVLPSSTMEISYGNNCMPVEHSEVAQPPVWGVPGSNLQSSSGNHHPDDSISSLISPSVKFGNEQDSSSSLFSNQDPWNLHGTYFPPPKPKKIALKKEMYPYNNQFGENPGNGGEQNLESQLDDGLYQMFRQNLTSDDVQSSKGSSEDRQNQQLQAVAEGVAASVLHSSTPSNPDLHARDVSHHEDIDNRDSQTNLIDIQCNDRTQVVKTKLPEKANFSFPASDIGSLQVIKNYDLEELIELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERLRTDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNERNCDKRKRHMIAMDAAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLSGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVTNTLRPPVPESCDPEWRFLMERCWSSEPSERPTFTEIANQLRFMASKIPPKGQNQQQQPASLQSQVQK 1423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1133 1423 Gene3D Phosphorylase Kinase; domain 1 1126 1220 - -
Lal21g1133 1423 PRINTS Tyrosine kinase catalytic domain signature 1215 1228 IPR001245 GO:0004672|GO:0006468
Lal21g1133 1423 PRINTS Tyrosine kinase catalytic domain signature 1252 1270 IPR001245 GO:0004672|GO:0006468
Lal21g1133 1423 PRINTS Tyrosine kinase catalytic domain signature 1323 1345 IPR001245 GO:0004672|GO:0006468
Lal21g1133 1423 PRINTS Tyrosine kinase catalytic domain signature 1367 1389 IPR001245 GO:0004672|GO:0006468
Lal21g1133 1423 CDD PB1_UP2 196 294 - -
Lal21g1133 1423 MobiDBLite consensus disorder prediction 931 971 - -
Lal21g1133 1423 MobiDBLite consensus disorder prediction 1404 1423 - -
Lal21g1133 1423 SMART PB1_new 207 296 IPR000270 GO:0005515
Lal21g1133 1423 Pfam PB1 domain 212 295 IPR000270 GO:0005515
Lal21g1133 1423 ProSiteProfiles Protein kinase domain profile. 1133 1399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g1133 1423 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 953 1403 - -
Lal21g1133 1423 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 160 942 - -
Lal21g1133 1423 SUPERFAMILY CAD & PB1 domains 208 300 - -
Lal21g1133 1423 MobiDBLite consensus disorder prediction 344 365 - -
Lal21g1133 1423 SUPERFAMILY Protein kinase-like (PK-like) 1126 1396 IPR011009 -
Lal21g1133 1423 Gene3D Transferase(Phosphotransferase) domain 1 1221 1423 - -
Lal21g1133 1423 ProSitePatterns Protein kinases ATP-binding region signature. 1139 1170 IPR017441 GO:0005524
Lal21g1133 1423 Gene3D - 213 296 - -
Lal21g1133 1423 MobiDBLite consensus disorder prediction 1400 1423 - -
Lal21g1133 1423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1258 1270 IPR008271 GO:0004672|GO:0006468
Lal21g1133 1423 MobiDBLite consensus disorder prediction 344 374 - -
Lal21g1133 1423 Pfam Protein tyrosine and serine/threonine kinase 1138 1396 IPR001245 GO:0004672|GO:0006468
Lal21g1133 1423 CDD STKc_MAP3K-like 1139 1396 - -
Lal21g1133 1423 SMART serkin_6 1133 1399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g1133 1423 PANTHER SERINE-THREONINE PROTEIN KINASE 953 1403 - -
Lal21g1133 1423 PANTHER SERINE-THREONINE PROTEIN KINASE 160 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1133 Lal-Chr21 13875267 13883255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1133 145 674 MAP Kinase Kinase Kinase AT3G46920 37.893 1.22e-84 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lal21g1133 PK_Tyr_Ser-Thr 3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1133 - - gmx:100776264 1789.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1133 21 13875267 13883255 Lal21g1133 21 13875267 13883255 ECH
Lal21g1133 21 13875267 13883255 Lal4g1385 4 18085641 18098974 LSH
Lal14g1729 14 17318346 17324936 Lal21g1133 21 13875267 13883255 PCT
Lal7g1132 7 17214503 17220770 Lal21g1133 21 13875267 13883255 PCT
Lal19g1275 19 15885030 15890702 Lal21g1133 21 13875267 13883255 PCT
Lal21g1133 21 13875267 13883255 Lal14g1729 14 17318346 17324936 PCT
Lal21g1133 21 13875267 13883255 Lal7g1132 7 17214503 17220770 PCT
Lal21g1133 21 13875267 13883255 Lal19g1275 19 15885030 15890702 PCT