Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1117 ATGGCTTCTGATATTTCATTCGAGGATCTCAAGAATGAGAATGTTGATCTAGAAAACATTCCAATTGAGGAGGTCTTTGAGAATCTAAAATGTACCAAAGAGGGTTTGTCATCCGAGGAAGGGCAGAAGAGGCTCCAGATTTTTGGCCCCAACAAGCTAGAGGAGAAAACAGAGAGCAAGTTCTTAAAATTCTTGGGTTTTATGTGGAATCCTCTATCATGGGTCATGGAAGCAGCAGCTATCATGGCCATTGTATTAGCCAATGGAGGGGGCAAACCACCGGATTGGCAAGATTTCACTGGCATTGTGGTTCTTCTTATTATTAACTCAACCATTAGTTTCATTGAGGAAAATAATGCAGGAAATGCCGCAGCTGCTTTGATGGCTGGTCTTGCACCAAAAACCAAGGCTGTTGTCATTGCCACTGGTGTCCACACCTTCTTTGGTAAGGCTGCACACCTTGTAGATAGTACAAACAATGTTGGCCACTTCCAAAAGATTTAA 504 0.4266 MASDISFEDLKNENVDLENIPIEEVFENLKCTKEGLSSEEGQKRLQIFGPNKLEEKTESKFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFTGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKAVVIATGVHTFFGKAAHLVDSTNNVGHFQKI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1117 167 Pfam Cation transporter/ATPase, N-terminus 19 82 IPR004014 -
Lal21g1117 167 Gene3D - 67 138 - -
Lal21g1117 167 PANTHER PLASMA MEMBRANE ATPASE 4 136 - -
Lal21g1117 167 PANTHER PLASMA MEMBRANE ATPASE 136 167 - -
Lal21g1117 167 SMART Cation_ATPase_N_a_2 16 88 IPR004014 -
Lal21g1117 167 PANTHER CALCIUM-TRANSPORTING ATPASE 136 167 - -
Lal21g1117 167 PANTHER CALCIUM-TRANSPORTING ATPASE 4 136 - -
Lal21g1117 167 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 166 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1117 Lal-Chr21 13757746 13758893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1117 136 167 Primary Pumps ATPases AT2G07560 93.750 4.48e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1117 K01535 - gmx:100798717 238.81