Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1112 ATGTCATCATCAAATGCACCACCATGTGCAGCATGCAAGCATATGAAGAGAAAATGTACACCACAATGTTTATTTGCACCATATTTCCCACCAGAAAATCTTCAACGCTTCGAACAAGTTCACAAAGTCTTTGGCTCCAACAATGTCTCAAAGATTTTACGTGAACTCAACCCTTGTCAACGTGAAGATGTTGTGAAATCTCTTGTATACCAAGCTGAGGCTCGTCTTCGTGATCCTGTGAATGGTTGCATAGGTTTTATTTCTGAATTGCATGATAGGTTGAATCAAATCAAGACTAATATTAACAACACAATGGAAGAAATCTCTACTTATCTTGGGCCTCAAGCTATGAAAACCCTAGAAGAAATGGTTCAAAACCCTAGTTTGGTTCCACCGATTGGGATGGTTATACCAAATATATATCATGATGGAAACTTTTCTTCATCAAAAGTTAATGGAAACATCAACATGGAGGCATCATCATCAGTGTCTATGGTAAAATCACATGATCAGTTAGTGATTCAGGATGATCAACAACAACCTTTATTGGAGGCTCAACCATTGGATACTGTTGGTAAGTTTGAAAGTGGTGGCGGCAGCGGCGGCGGCGGCGGCAGTGATGTTAGCCCTCACAAAATTCAGCAACAGGAAGGGGAAAATAATATACTAGATTCTAATTCTCCTCACCATCCTAATGAGGCACAAGCTTAA 711 0.3994 MSSSNAPPCAACKHMKRKCTPQCLFAPYFPPENLQRFEQVHKVFGSNNVSKILRELNPCQREDVVKSLVYQAEARLRDPVNGCIGFISELHDRLNQIKTNINNTMEEISTYLGPQAMKTLEEMVQNPSLVPPIGMVIPNIYHDGNFSSSKVNGNINMEASSSVSMVKSHDQLVIQDDQQQPLLEAQPLDTVGKFESGGGSGGGGGSDVSPHKIQQQEGENNILDSNSPHHPNEAQA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1112 236 Coils Coil 87 107 - -
Lal21g1112 236 Pfam Lateral organ boundaries (LOB) domain 8 103 IPR004883 -
Lal21g1112 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 180 - -
Lal21g1112 236 MobiDBLite consensus disorder prediction 190 236 - -
Lal21g1112 236 MobiDBLite consensus disorder prediction 209 236 - -
Lal21g1112 236 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Lal21g1112 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 5 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1112 Lal-Chr21 13660926 13661636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1112 3 236 AS2 family AT5G66870 38.397 6.15e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal21g1112 LOB 1.8e-36 No_clan