Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1106 ATGGCTGATCACCAACACTGTTTGAAGGAAAATGAAAAGGAAATAGAAGGAGAGATACATAAACGAGTTAGCGACTCACCTTCTACCACTGAGTCTCATCATGCCGAGTTAAATAGTTCCGATGAAGCGGAACCTAATTTACAAACCCTAGTTCTTCCCTCTTCGCTCCTGCTCGATCACACTGCCGAAAGTAAGCAGCCAGTTGGACCTAGTGATAAGCAAATTATTGTAAAAGAAGTTGATGTGCCTCAAATCGGGACAGAAAATCGACTTCAGATCGTTGCGTGTTCAAGTCCATTGTCTGAACTATCACCAACTTTTGTTGCTCCGAGTCGAACTTTACAAGAACAGAGGCTGTTACCGCCGAAGGTTAATAGTCCACATATGGCAGAAGTAGAAAGTAAAACTCATAAAGGTGGCAAAGCCTCACCTTCTGTTTCAGCTGCAAGGACTTGTGCACCTGATGGATACAACTGGAGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCGATGGGTTCTAGAAGCTATTACCGGTGTACCAATTCGGATTGTTCTGCAAAGAAGATTGAATTCTGTGACCATTCAGGTCAGGTGATAGAGATTGTTTATAGAAGTCAACATAGTCATGATCCCTCACAGAAGATTAATTCCAGTAGGGAAAGTAAGTCCGTGCCTTCTAATAAACCTATTGTAGAAATCAGTGTTCCGGAGCAGCGTATCGAAGTTGTAAATGATTCCAGGCCATCCTCTTCTTCAAGAGAACGTGAACAAGAAGTACCTTGCGGTGCTAGTGCTGATAAGAAACAACAAAACTCGTCTAACAATGACAATTGTAAAGTTATTTTGAAGGAGGAGGATGCTAATGAGCCTGAGCTGAAAAGAAGCAATTTTGTAATGAAGAAGGACGATTTAACAAGCTTGGAGTCACCGGTAAAACCTGGAAAGAAACCCAAGCTTGTTGTACATGCGGCAGGGGATGTGGGGATATCGGGAGATGGATACCGATGGCGCAAATATGGACAAAAAATGGTGAAGGGGAATCCACATCCCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCCGAAAGCACATCGAAACTGCTAAGGATAACACAAATGCAGCCATCATAACATACAACGGAGTACATGACCATGATATGCCTGTGCCCAAGAAACGACACGGCCCCCCAACTGCGCCGCTCGTGGCTGCTGCAACACCTTCTTCATCGAACAATTTGAATTCCACAAGAACGGACTCGCTGCAAAATGAGAGAACTTCTACTCGATGGTCGGTGGACACGGATGGAGAATTAAAAGGGGAAGCCTTGGACCTTGGTGGTGAGAAAGCAATAGAGTCTGCTCAAACTCTTCTGAGCATTGGTTTTGAAATTAAACCTTGCTGA 1410 0.4411 MADHQHCLKENEKEIEGEIHKRVSDSPSTTESHHAELNSSDEAEPNLQTLVLPSSLLLDHTAESKQPVGPSDKQIIVKEVDVPQIGTENRLQIVACSSPLSELSPTFVAPSRTLQEQRLLPPKVNSPHMAEVESKTHKGGKASPSVSAARTCAPDGYNWRKYGQKQVKSPMGSRSYYRCTNSDCSAKKIEFCDHSGQVIEIVYRSQHSHDPSQKINSSRESKSVPSNKPIVEISVPEQRIEVVNDSRPSSSSREREQEVPCGASADKKQQNSSNNDNCKVILKEEDANEPELKRSNFVMKKDDLTSLESPVKPGKKPKLVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAKDNTNAAIITYNGVHDHDMPVPKKRHGPPTAPLVAAATPSSSNNLNSTRTDSLQNERTSTRWSVDTDGELKGEALDLGGEKAIESAQTLLSIGFEIKPC 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1106 469 MobiDBLite consensus disorder prediction 1 40 - -
Lal21g1106 469 MobiDBLite consensus disorder prediction 206 277 - -
Lal21g1106 469 SUPERFAMILY WRKY DNA-binding domain 151 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal21g1106 469 MobiDBLite consensus disorder prediction 405 431 - -
Lal21g1106 469 Pfam WRKY DNA -binding domain 155 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal21g1106 469 Pfam WRKY DNA -binding domain 332 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal21g1106 469 ProSiteProfiles WRKY domain profile. 148 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal21g1106 469 MobiDBLite consensus disorder prediction 386 432 - -
Lal21g1106 469 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 467 IPR044810 GO:0003700
Lal21g1106 469 MobiDBLite consensus disorder prediction 1 46 - -
Lal21g1106 469 ProSiteProfiles WRKY domain profile. 325 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal21g1106 469 MobiDBLite consensus disorder prediction 125 148 - -
Lal21g1106 469 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 40 467 - -
Lal21g1106 469 SMART WRKY_cls 153 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal21g1106 469 SMART WRKY_cls 330 389 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal21g1106 469 Gene3D WRKY domain 141 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal21g1106 469 Gene3D WRKY domain 315 391 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal21g1106 469 MobiDBLite consensus disorder prediction 248 262 - -
Lal21g1106 469 SUPERFAMILY WRKY DNA-binding domain 326 390 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal21g1106 469 MobiDBLite consensus disorder prediction 206 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1106 Lal-Chr21 13631492 13636179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1106 150 469 WRKY Transcription Factor Family AT4G30935 57.895 1.78e-113 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal21g1106 WRKY 2.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1106 - - gmx:100127377 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1106 21 13631492 13636179 Lal21g1106 21 13631492 13636179 ECH