Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1089 ATGGAGTTGAAAAAGGGAAAGCTTGTTAGGTTCTACACCGAGGGCAAAAAGCATAAAGAACCACTGTGGGGATCAACTGAATCACCATCACTTGAAAAGTCTTCCTCCTCATACAAGGTTCAGCCGTATTCTATGCATAAAACAAGAAATGCACCACCATTAGGGAAAAATAGATTTCCTGAATTGTGTAGAGATGAAGGATCTAAGGTATTTGCAGAGGACCATGAACCATGGCGTAAAAGAATACTTGACCCTGGTAGCGAGATTGTATTAAAATGGAACCGAGTCTTTATAGTTTCATGCTTGGTGGCTCTTTTTATTGACCCGTTGTACTTTTATTTGCCAAGTGTTAGTGGAAACACAAGGTCCTCGTGTGTGAGGACAGACCTCATGTTACGGATTGTTGTGACCTTTCTTCGCACTATCGCGGATGTTTTTTATCTGTTGCACCTGATAATTAAGTTCAGAACAGCATATGTAGCACCAAGCTCAAGGGTATTTGGTAGGGGCGAACTTGTGATGGACCCAAAAAAAATTGCAAGGAGATATATTAGAACCGATTTCTTCATTGATTTTATTGCCACACTTCCTCTGCCACAGATGGTCATATGGTTTATCATACCGGCAACAAGATCCCCTCTAGCTGATCACAAGAACAATGCTCTTGCTTTGATTGTTTTACTCCAATATGTTCCGAGATTGTATTTGATTTTTCCGTTAAGTTCTCAAATAATCAAAGCAACAGGAGTGGTTACGAAGACTGCTTGGGCCGGAGCTGCGTATAATCTGCTATTGTATATGTTAGCTAGCCATGTTTTAGGGGCATCTTGGTATCTTCTGTCTGTGGACCGATATACTACATGTTGGAAATCCATCTGCAAAACGGAATCTAACCCTGAAAACTGCTTAAGTTACCTCGACTGCAGTAGTTATAATGATAAGCAGCGTAATCTATGGGCAAACAGTACAAATGTTTTTTACCGCTGTGATCCCAATAACACTATTGTTTTCCAGTATGGCTTATTTGAAAAAGCAGTCACAAAGAACGTTGTCACTTCAAACTTTATCCAAAAGTACTTTTATTGTTTATGGTGGGGGCTGCAGCAATTAAGTTCTTATGGGCAGAACCTAGAAACAAGCACTTTTATCGGTGAAACATCATTTGCTATTCTCATTTCCATCTTCGGTCTTGTATTATTTGCCCATTTGATTGGGAACATGCAGACATACTTGCAATCGATTACTATAAAGCTTGAAGAGTGGAGGCTTAAGCGAAGAGATACAGAGGAATGGATGAGCCATCGACAACTCCCTGAAGATTTGAGACGCTGTGTTAGACGATTCATCCAATATAAATGGCTTGCAACTCGTGGAGTTGATGAAGAAACCATTTTACGTGCATTGCCTGCTGATCTTCGCCGCGATATCCAAAGTCACCTATGCTTAGACCTTGTTAGACGGGTTCCCTTCTTCTCACAGATGGATGACCAACTCCTCGATGCAATATGTGAGCGGCTGGTATCTTCTCTCAGCACTTTAGGCACGTACATTGTTCGTGAGGGTGACCCCGTGACTGAAATGCTCTTTATCATCAGAGGTAGACTAGACAGTTCTACTACAAATGGTGGCCGGACTGGTTTCTTTAACTCAACCATATTGAGACCAGGAGATTTTTGTGGCGAAGAACTACTTTCTTGGGCTTTACTCCCAAAATCGACCACGAATTTGCCTTCTTCAACTAGAACAGTTAAGGCCATAAGCGAGGTTGAAGCTTTTGCTCTTCGGGCTGAAGACCTCAAGTTTGTAGCTAATCAATTTAGGCGCCTCCACAGCAAGAAGCTGCAGCACACATTCCGGTTTTATTCCCACCATTGGAGGACATGGGCATCGTGCTTCATTCAAGCTGCTTGGCGTCGATATAAGAAAAGGATGTCTAGCAAAAACCTCATTCCGAGGGAATCCATTAATTTAGATGAGACTCTAGCAAATGAGAGAGAGCATGAGGAGGAATATCCTTCTGGTTCAAATTCTTCTCAGCCGAAAATGAATCTCGGGGTCACAATACTTGCTTCAAGGTTTGCTGCTAACACAAGAAGAGGAGCTCTGAAGATGAAAGATGACCTACCCAAGTTACCTAAACCTGAAGAACCTGATTTTTCTACTGAAGCTGATGAAGATTAG 2181 0.4186 MELKKGKLVRFYTEGKKHKEPLWGSTESPSLEKSSSSYKVQPYSMHKTRNAPPLGKNRFPELCRDEGSKVFAEDHEPWRKRILDPGSEIVLKWNRVFIVSCLVALFIDPLYFYLPSVSGNTRSSCVRTDLMLRIVVTFLRTIADVFYLLHLIIKFRTAYVAPSSRVFGRGELVMDPKKIARRYIRTDFFIDFIATLPLPQMVIWFIIPATRSPLADHKNNALALIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSVDRYTTCWKSICKTESNPENCLSYLDCSSYNDKQRNLWANSTNVFYRCDPNNTIVFQYGLFEKAVTKNVVTSNFIQKYFYCLWWGLQQLSSYGQNLETSTFIGETSFAILISIFGLVLFAHLIGNMQTYLQSITIKLEEWRLKRRDTEEWMSHRQLPEDLRRCVRRFIQYKWLATRGVDEETILRALPADLRRDIQSHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTLGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNSTILRPGDFCGEELLSWALLPKSTTNLPSSTRTVKAISEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWASCFIQAAWRRYKKRMSSKNLIPRESINLDETLANEREHEEEYPSGSNSSQPKMNLGVTILASRFAANTRRGALKMKDDLPKLPKPEEPDFSTEADED 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1089 726 MobiDBLite consensus disorder prediction 701 718 - -
Lal21g1089 726 Pfam Ion transport protein 93 415 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lal21g1089 726 Pfam Cyclic nucleotide-binding domain 514 601 IPR000595 -
Lal21g1089 726 Gene3D - 95 415 - -
Lal21g1089 726 SUPERFAMILY Voltage-gated potassium channels 87 412 - -
Lal21g1089 726 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 62 723 - -
Lal21g1089 726 SMART cnmp_10 490 621 IPR000595 -
Lal21g1089 726 ProSiteProfiles cAMP/cGMP binding motif profile. 490 574 IPR000595 -
Lal21g1089 726 PRINTS EAG/ELK/ERG potassium channel family signature 151 160 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lal21g1089 726 PRINTS EAG/ELK/ERG potassium channel family signature 268 278 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lal21g1089 726 PRINTS EAG/ELK/ERG potassium channel family signature 359 376 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lal21g1089 726 PRINTS EAG/ELK/ERG potassium channel family signature 385 396 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lal21g1089 726 PRINTS EAG/ELK/ERG potassium channel family signature 403 412 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lal21g1089 726 PRINTS EAG/ELK/ERG potassium channel family signature 453 460 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lal21g1089 726 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 723 - -
Lal21g1089 726 SUPERFAMILY cAMP-binding domain-like 419 612 IPR018490 -
Lal21g1089 726 CDD CAP_ED 490 621 IPR000595 -
Lal21g1089 726 MobiDBLite consensus disorder prediction 17 42 - -
Lal21g1089 726 MobiDBLite consensus disorder prediction 701 726 - -
Lal21g1089 726 Gene3D Helix hairpin bin 417 481 - -
Lal21g1089 726 MobiDBLite consensus disorder prediction 27 42 - -
Lal21g1089 726 Gene3D Jelly Rolls 488 608 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1089 Lal-Chr21 13178730 13185372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1089 1 725 Ion Channels AT4G30360 69.262 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1089 K05391 - gmx:100810967 1207.59