Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1068 ATGGAGCATGATGAATCTCAACCACTCATAAATGATGAGCCCAAAGATACTTTTGTTGGTCAAATTGTAAAGAACATAGATGAAGCTTATAATCTATATCAAGCACATGCTTTCAAAATGGGTTTCAGTGTTAGGAAAGGTCAACAACAATTTTATGATAATGATAGAAAAAATATACGACTGAAAGAATATTATTGTTCTAAAAAAGGGTTTAAGAACAATGAACTTCAAGGTGAGGTGGCTTATGAGAGAGCAGATTCAAGAACGGGGTGTGAAGCTATGGTACGATTTAATGTGAACAAGGAAGGACAATGGAAAATTACAAAACTAGTACTTGATCACAACCATGAGTTTGCTCAGCCCCATCAAAGACATTTATTACGTTCTATGAGAAATATATCTGCTACTAAAGGAGATGTGATAAAGTCACTAGTAAATGTTGGTATGAGTGATGCATGGAACTATAATGGGGAAGAGGTCAGTGTATTTGATAAAGCTAGTTCAATAGTAAAAGATATGCAAAACTTTGTATACACTCAAAAGGTGAAATCCATTGAAGCCGGTGATGCTCAATCTTTAGTGAATCAGTTACAAAAAAGACAATCAGAAGATCCCATGTTCTACTATACAGTTCAGTTCGACCAAGAGTCCCGTTTAACCAATGTCTTCTGGAGAGATGGTAAATCAAAACTTGATTATGATTGTTTTGGAGATGTTATGGTTTTTGACACCACTTACCGTACTAATAGATTTAATTTGATTTGTGCACCCTTTGTTGGTGTAAATCATCATTGGCAAAATGTGATGTTTGGTTGTGCCTTGCTAGCTGATGAAACAGCAGTTTCTTTTACGTGGTTGTTTAAAGCATTTTTGGAGAGCATGGGAAACCAACAACCAAAAAGAATTTTCACACATCAAGATGCATCCATGGCCAAAGCAATTAGAGAGCTCAAACTGAATCCATATGTAATAACAAATGACATCAATTCCACTCAAAATGAGAATAATGGACATGTTTCAGTTCTAAATCCTCTCCTTGCAAAGACTAATGGAATGTCTACTACTCGAAAGAAAGGACATTTTCAGAAAAGGAAGCGTTCTACCACAATAGTGAAGAAAAATAAAGAGAAACGGAAAGAAAGAAGTGAGTTTTGTGATACCAATAAGTATAGCAATGACTCTAATATGCCATCAAGTACAATGTCACTATATAAACCTATCATGCCTCAAATGGCTCCACCTATCATACCTCAAATGGCTCCATCTATCATACCTCAAATGACTTCATCTCAAATTCTATTTGGTAGTCCACTGATCCTACAACCAGCATTTGGAATGCAAAATATTGGGCCAACACCCATTAGACCCCATGCTCTAAGGAAAAAGACAAGTGAAGATGGGACTGGGAGTGAAAACCATGTTAATACTAGAGTGAATTATTAA 1443 0.3583 MEHDESQPLINDEPKDTFVGQIVKNIDEAYNLYQAHAFKMGFSVRKGQQQFYDNDRKNIRLKEYYCSKKGFKNNELQGEVAYERADSRTGCEAMVRFNVNKEGQWKITKLVLDHNHEFAQPHQRHLLRSMRNISATKGDVIKSLVNVGMSDAWNYNGEEVSVFDKASSIVKDMQNFVYTQKVKSIEAGDAQSLVNQLQKRQSEDPMFYYTVQFDQESRLTNVFWRDGKSKLDYDCFGDVMVFDTTYRTNRFNLICAPFVGVNHHWQNVMFGCALLADETAVSFTWLFKAFLESMGNQQPKRIFTHQDASMAKAIRELKLNPYVITNDINSTQNENNGHVSVLNPLLAKTNGMSTTRKKGHFQKRKRSTTIVKKNKEKRKERSEFCDTNKYSNDSNMPSSTMSLYKPIMPQMAPPIIPQMAPSIIPQMTSSQILFGSPLILQPAFGMQNIGPTPIRPHALRKKTSEDGTGSENHVNTRVNY 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1068 480 MobiDBLite consensus disorder prediction 372 398 - -
Lal21g1068 480 PANTHER OS12G0160900 PROTEIN 10 317 - -
Lal21g1068 480 MobiDBLite consensus disorder prediction 373 387 - -
Lal21g1068 480 Pfam FAR1 DNA-binding domain 32 119 IPR004330 -
Lal21g1068 480 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 317 IPR031052 GO:0006355
Lal21g1068 480 MobiDBLite consensus disorder prediction 456 480 - -
Lal21g1068 480 Pfam MULE transposase domain 239 316 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1068 Lal-Chr21 12754712 12757172 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal21g1068 FAR1 3.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1068 - - lang:109356295 483.026