Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1032 ATGGGGACTTCAGCAAACGCTGCTGGCGGCTGCAGCACCCCCACCCTGGACAAGGACGTTGATTACGCCCAATATTTCTGCACCTATTCTTTCCTTTACCACCAAAAGGAAATGCTCTCCGATCATGTTCGTATGGACTCTTATTTCAATGCAATTTTTCAGAACAAACACCACTTCATTGGCAAGACTGTTTTGGATGTTGGAACTGGAAGTGGCATTCTTGCTATATGGTCAGCACAAGCAGGTGCAAGGAAAGTATATGCAGTGGAAGCTACTAAGATGTCAGAACATGCCCGTGTGCTTGTTAAAGCAAATAATCTCCAAGATGTAGTTGAAGTCATTGAGGGCTCAATCGAGGACATATCCTTCCCAGAGAAAGTGGATGTGATCATCTCTGAGTGGATGGGTTATTTTCTCCTGCGTGAATCTATGTTTGATTCAGTTATATGTGCTCGTGACCGTTGGCTCAAACCAACAGGAGTGATGTATCCTAGTCATGCTCGTATGTGGATGGCACCTATTAGAACTGGGATAACAGATCATAAAATGGGTGATTACCGGTCAGCTATGGATGATTGGCGTAACTTTGTTGATGAAACAAAAGCCTGCTATGGAACATCATTATGGAACAACCTTCATCCACATCAAGTCATTGGAACTGCTGCTATAATAAAGGAAATTGATTGTTTAACTGCCACGGTGACTGAGATAGAGAAAGTCAGATCAAAGTTTTCGTTGTCAATAATTGGGGAAAACACAAAGTTGTGTGGGTTAGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAAGCGAGGATCCAGCTTCACAGGAGATTGAGTTAACTACAGCTCCTAGTGTACATTACACTACACACTGGGGCCAACAGGTTTTTCTCTTGCATCCTCCTACACATGTGGGTGAAGGTGATGACTTGAGTATTTCTTTCCTAATGAGTCGCTCTAAGGAAAACCATCGCCTGATGGAGGTTGAACTCGGGTGTGAGATTCAACAAAAATCTGGCAAGCTTCTCGCGCCTTACAAAACTAAGATTGTGCATTACAAGAATTGCCATCTGGTGGAATTGCACTATTATCACTCTGGTGTTGCATTTGTTCCTTCTGATAAAGTTACTGAAGAAAGTGGTTCAAACTATACATATATATATATAATATATATAACAACTTTGGCTTTCCAAGAATCTGGTTATGACTTGTGTCAAGTGCTTTTGTTCAGCAGATTGATGGTTGGATACCCAAGTGTTTGTTATATTTGCCTGAGCTTCAGTAGAAGATTGTGGCCGTTTTTGCTTCATAAAAATCATGTTTCATTGGAGTTATTGGTGACTTAA 1347 0.4157 MGTSANAAGGCSTPTLDKDVDYAQYFCTYSFLYHQKEMLSDHVRMDSYFNAIFQNKHHFIGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARVLVKANNLQDVVEVIEGSIEDISFPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTGITDHKMGDYRSAMDDWRNFVDETKACYGTSLWNNLHPHQVIGTAAIIKEIDCLTATVTEIEKVRSKFSLSIIGENTKLCGLGGWFDVHFRGRSEDPASQEIELTTAPSVHYTTHWGQQVFLLHPPTHVGEGDDLSISFLMSRSKENHRLMEVELGCEIQQKSGKLLAPYKTKIVHYKNCHLVELHYYHSGVAFVPSDKVTEESGSNYTYIYIIYITTLAFQESGYDLCQVLLFSRLMVGYPSVCYICLSFSRRLWPFLLHKNHVSLELLVT 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1032 448 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 336 IPR029063 -
Lal21g1032 448 Gene3D Vaccinia Virus protein VP39 19 164 IPR029063 -
Lal21g1032 448 Gene3D - 166 351 - -
Lal21g1032 448 CDD AdoMet_MTases 63 163 - -
Lal21g1032 448 Pfam Ribosomal protein L11 methyltransferase (PrmA) 61 133 - -
Lal21g1032 448 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 12 341 IPR025799 GO:0016274|GO:0018216
Lal21g1032 448 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 330 IPR025799 GO:0016274|GO:0018216
Lal21g1032 448 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 12 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1032 Lal-Chr21 12129496 12135990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1032 24 312 C2H2 Transcription Factor Family AT3G12270 32.278 3.19e-37 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1032 21 12129496 12135990 Lal21g1032 21 12129496 12135990 ECH